tglobal.txt - pism - [fork] customized build of PISM, the parallel ice sheet model (tillflux branch) (HTM) git clone git://src.adamsgaard.dk/pism (DIR) Log (DIR) Files (DIR) Refs (DIR) LICENSE --- tglobal.txt (6396B) --- 1 .. -*- mode: rst -*- 2 3 .. default-role:: math 4 5 .. roles 6 7 .. role:: red 8 :class: red 9 10 .. role:: green 11 :class: green 12 13 .. role:: blue 14 :class: blue 15 16 .. role:: var(literal) 17 :class: variable 18 19 .. role:: opt(literal) 20 :class: option 21 22 .. role:: config(literal) 23 :class: config 24 25 .. substitutions 26 27 .. |petsc-min-version| replace:: 3.5 28 29 .. |pism-email| replace:: uaf-pism@alaska.edu 30 .. |pism-docs| replace:: https://pism-docs.org 31 .. |petsc-download| replace:: https://www.mcs.anl.gov/petsc/download/index.html 32 33 .. |efischer-email| replace:: elizabeth.fischer@columbia.edu 34 .. |jseguinot-email| replace:: seguinot@vaw.baug.ethz.ch 35 36 .. |pism-browser| replace:: PISM *Source Code Browser* 37 38 .. |config-cdl| replace:: ``src/pism_config.cdl`` 39 .. |config-file| replace:: ``pism_config.nc`` 40 41 .. |pism-regional-tools-url| replace:: https://github.com/pism/regional-tools 42 .. |pism-github-url| replace:: https://github.com/pism/pism 43 .. |pism-issues-url| replace:: https://github.com/pism/pism/issues 44 45 .. |mismip-url| replace:: http://homepages.ulb.ac.be/~fpattyn/mismip/ 46 .. |mismip3d-url| replace:: http://homepages.ulb.ac.be/~fpattyn/mismip3d/ 47 .. |eismint-url| replace:: http://homepages.vub.ac.be/~phuybrec/eismint.html 48 .. |ismip-url| replace:: http://homepages.vub.ac.be/~phuybrec/ismip.html 49 50 .. |sphinxcontrib-bibtex-url| replace:: https://sphinxcontrib-bibtex.readthedocs.io/en/latest/ 51 52 .. external links 53 54 .. _Bash: http://www.gnu.org/software/bash/ 55 .. _CalCalcs: http://meteora.ucsd.edu/~pierce/calcalcs/calendars.html 56 .. _CalCalcs-home: http://meteora.ucsd.edu/~pierce/calcalcs/index.html 57 .. _CDO: https://code.mpimet.mpg.de/projects/cdo 58 .. _CF-cell-boundaries: http://cfconventions.org/Data/cf-conventions/cf-conventions-1.7/cf-conventions.html#cell-boundaries 59 .. _CF Conventions: http://cfconventions.org/Data/cf-conventions/cf-conventions-1.7/cf-conventions.html 60 .. _CF-Calendars: http://cfconventions.org/Data/cf-conventions/cf-conventions-1.7/cf-conventions.html#calendar 61 .. _CF-standard-names: http://cfconventions.org/standard-names.html 62 .. _cf-names-for-glaciology: http://websrv.cs.umt.edu/isis/index.php/CF_standard_names_for_Glaciology_and_Ice-Sheet_Modeling 63 .. _cf-names-proposed: http://cfeditor.ceda.ac.uk/proposals/1 64 .. _CMake: https://cmake.org/ 65 .. _CMake-cross-compiling: https://cmake.org/Wiki/CMake_Cross_Compiling 66 .. _Enthought: https://www.enthought.com/ 67 .. _FFTW: http://www.fftw.org/ 68 .. _Fink: http://www.finkproject.org/ 69 .. _GSL: http://www.gnu.org/software/gsl/ 70 .. _Git: https://git-scm.com/ 71 .. _Git documentation: https://git-scm.com/doc 72 .. _Homebrew: https://brew.sh/ 73 .. _IDV: https://www.unidata.ucar.edu/software/idv/ 74 .. _LaTeX: https://www.latex-project.org/ 75 .. _latexmk: http://personal.psu.edu/jcc8//software/latexmk-jcc/ 76 .. _MPI: https://www.mcs.anl.gov/research/projects/mpi/ 77 .. _MacPorts: https://www.macports.org/ 78 .. _measures-ross: https://nsidc.org/data/NSIDC-0484 79 .. _NSIDC: https://nsidc.org 80 .. _NCL: http://www.ncl.ucar.edu 81 .. _NCO: http://nco.sourceforge.net/ 82 .. _NetCDF: https://www.unidata.ucar.edu/software/netcdf/ 83 .. _netcdf-classic-format: https://www.unidata.ucar.edu/software/netcdf/docs/file_structure_and_performance.html#classic_file_parts 84 .. _NumPy: https://www.numpy.org/ 85 .. _Open MPI: https://www.open-mpi.org 86 .. _PETSc-installation: https://www.mcs.anl.gov/petsc/documentation/installation.html 87 .. _PETSc: https://www.mcs.anl.gov/petsc/ 88 .. _PROJ: https://proj.org/ 89 .. _PnetCDF: https://parallel-netcdf.github.io/ 90 .. _Python: https://www.python.org 91 .. _Sphinx: http://www.sphinx-doc.org/en/master/usage/installation.html 92 .. _sphinxcontrib.bibtex: https://sphinxcontrib-bibtex.readthedocs.io/en/latest/ 93 .. _UDUNITS: https://www.unidata.ucar.edu/software/udunits/ 94 .. _Ubuntu: https://ubuntu.com/desktop 95 .. _X: https://www.x.org/wiki/ 96 .. _XCode: https://developer.apple.com/xcode/ 97 .. _XQuartz: https://www.xquartz.org/ 98 .. _doxygen: http://www.doxygen.nl 99 .. _graphviz: http://www.graphviz.org/ 100 .. _matplotlib: https://matplotlib.org/ 101 .. _ncview: http://meteora.ucsd.edu/~pierce/ncview_home_page.html 102 .. _netcdf4-python: https://pypi.org/project/netCDF4 103 .. _pyngl: http://www.pyngl.ucar.edu 104 .. _SeaRISE-Greenland: http://websrv.cs.umt.edu/isis/index.php/Model_Initialization#Greenland 105 .. _searise-greenland-data: http://websrv.cs.umt.edu/isis/index.php/Present_Day_Greenland 106 .. _searise: http://websrv.cs.umt.edu/isis/index.php/SeaRISE_Assessment 107 .. _mismip-code: http://homepages.ulb.ac.be/~fpattyn/mismip/MISMIP_distribution.tar 108 .. _reStructuredText: https://docutils.readthedocs.io/en/sphinx-docs/user/rst/quickstart.html 109 .. _Emacs: https://www.gnu.org/software/emacs/ 110 .. _GDB: https://www.gnu.org/software/gdb/ 111 .. _LLDB: https://lldb.llvm.org/ 112 .. _Valgrind: http://www.valgrind.org/ 113 .. _ccache: https://ccache.dev/ 114 115 .. _github-help-fork: https://help.github.com/en/articles/fork-a-repo 116 .. _github-pull-request-create: https://help.github.com/en/articles/creating-a-pull-request 117 .. _github-pull-request-allow-edits: https://help.github.com/en/articles/allowing-changes-to-a-pull-request-branch-created-from-a-fork 118 119 .. _git-branching-model: https://nvie.com/posts/a-successful-git-branching-model/ 120 .. _git-fun-with-merges: https://gitster.livejournal.com/42247.html 121 .. _sphinx-autobuild: https://pypi.org/project/sphinx-autobuild/ 122 .. _keep-a-change-log: https://keepachangelog.com/ 123 124 .. _GitHub: https://github.com/ 125 .. _CircleCI: https://circleci.com/ 126 .. _CircleCI CLI: https://circleci.com/docs/2.0/local-cli/ 127 .. _Docker: https://www.docker.com/ 128 .. _MPICH: https://www.mpich.org/ 129 .. _Spack: https://spack.io/ 130 .. _Spack documentation: https://spack.readthedocs.io/en/latest/ 131 .. _KDevelop: https://www.kdevelop.org/ 132 .. _Kaye and Laby: https://web.archive.org/web/20190506031327/http://www.kayelaby.npl.co.uk/ 133 134 .. _Ismip6-greenland: http://www.climate-cryosphere.org/wiki/index.php?title=ISMIP6-Projections-Greenland 135 .. _ParallelIO: https://ncar.github.io/ParallelIO/ 136 137 .. _HDF5: https://portal.hdfgroup.org/display/HDF5/HDF5 138 .. _Lustre: http://lustre.org/ 139 140 .. PISM-related external links 141 142 .. _pism-github: https://github.com/pism/pism 143 .. _pism-builds: https://github.com/pism/pism-builds 144 .. _PISM: https://pism-docs.org/wiki/doku.php 145 .. _pism-browser: https://pism-docs.org/doxy/html/index.html 146 .. _pism-email: mailto:uaf-pism@alaska.edu 147 .. _pypismtools: https://github.com/pism/pypismtools 148 .. _regional-tools: https://github.com/pism/regional-tools