[HN Gopher] Scientists pull living microbes, possibly 100M years...
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       Scientists pull living microbes, possibly 100M years old, from
       beneath the sea
        
       Author : walterbell
       Score  : 97 points
       Date   : 2020-07-28 16:11 UTC (6 hours ago)
        
 (HTM) web link (www.sciencemag.org)
 (TXT) w3m dump (www.sciencemag.org)
        
       | rbartelme wrote:
       | It's a big logical leap to the conclusion that this will "doom us
       | all". It's even sillier to be afraid of sediment core incubation
       | experiments with destructive sampling techniques. Don't you
       | think?
        
         | dreen wrote:
         | People automatically fear things that in some way may exceed
         | some of their own limitations, in however minor way. A defense
         | mechanism of our cavemen brains.
        
       | cerealbad wrote:
       | Anyone with a passing interest in this or adjacent fields should
       | check out the Deep Carbon Observatory website.
       | 
       | https://deepcarbon.net/worlds-oldest-groundwater-supports-li...
       | 
       | https://en.wikipedia.org/wiki/Sulfate-reducing_microorganism...
        
       | dumbfoundded wrote:
       | I wonder if there's any depth we've searched where we haven't
       | found life. It looks like life is everywhere we look. Is there
       | anywhere on Earth there isn't some microbe living?
        
         | hosteur wrote:
         | In the center?
        
           | dumbfoundded wrote:
           | It's kind of hard to look there.
        
         | Someone wrote:
         | Reading
         | https://www.nationalgeographic.com/news/2017/04/deepest-
         | life..., scientists think temperatures above 250F (120 degC)
         | aren't compatible with life as we know it (carbon-based, using
         | water), and, because of that, there isn't life below 6 miles
         | down.
         | 
         | Reading https://en.wikipedia.org/wiki/Methanopyrus, about a
         | microbe that "can survive and reproduce at 122 degC", that
         | limit may be based on observation, rather than first
         | principles. Regardless, I would take it with a grain of salt.
        
           | close04 wrote:
           | Some archaea species like Geogemma barosii [0] can survive
           | and reproduce at temperatures above 121 degC (the temperature
           | used in many autoclaves for example).
           | 
           | [0] https://en.wikipedia.org/wiki/Strain_121
        
             | dumbfoundded wrote:
             | That's pretty awesome that the only limitations of life on
             | Earth appear to be pressure and temperature.
        
         | nuccy wrote:
         | Just to put a bit of a context here, life exists on Earth for 4
         | billion years (single celled), and 1.5 billion years
         | (multicellular) [1]. There were few mass extinction events in
         | the history of Earth, at least 5 happened in the last 540
         | million years with up to 50% of life disappearing [2]. There
         | were before periods with much more diverse life, than what we
         | have now, so probably life before occupied the whole planet
         | [3], obviously not all of that species left themselves in
         | fossils, so exact numbers are a matter of big debates.
         | 
         | [1]
         | https://en.wikipedia.org/wiki/Timeline_of_the_evolutionary_h...
         | 
         | [2] https://en.wikipedia.org/wiki/Extinction_event
         | 
         | [3] https://en.wikipedia.org/wiki/Cambrian_explosion
        
           | close04 wrote:
           | > 50% of life
           | 
           | Worse, 50% of species. And the P-T extinction was the worst
           | with an estimated 96% of all marine species and 70% of
           | terrestrial vertebrates becoming extinct.
        
       | mrtri wrote:
       | how they know it's 100M years old? carbon dating goes max 50,000
       | years back, other radiodating methods are not accurate, they
       | dated newly formed lava stones in hawaii and came with million
       | year old numbers, besides if a microbe died on a old rock doesnt
       | mean it is as old as the rock.
        
       | ncmncm wrote:
       | Maybe now the bacteria revived from 40Mya amber are believable.
        
       | freedomben wrote:
       | Related: I recently read "The Story of Earth" by Robert Hazen and
       | it's a fascinating read. Highly recommend. The author also has a
       | few Great Courses courses. "The Origin and Evolution of Earth" is
       | a companion to the book (it covers much of the same material) but
       | the two together left me with significant retention of the
       | material. It's fascinating to go out hiking now with my kids and
       | be able to entertain and educate them with facts about the rocks
       | and formations we are hiking on :-)
        
       | sradman wrote:
       | The paper _Aerobic microbial life persists in oxic marine
       | sediment as old as 101.5 million years_ [1]:
       | 
       | > Our results suggest that microbial communities widely
       | distributed in organic-poor abyssal sediment consist mainly of
       | aerobes that retain their metabolic potential under extremely
       | low-energy conditions for up to 101.5 Ma.
       | 
       | > Dominant bacterial groups included Actinobacteria,
       | Bacteroidetes, Firmicutes, Alphaproteobacteria,
       | Betaproteobacteria, Gammaproteobacteria, and Deltaproteobacteria
       | (Fig. 3b, c) with a minor fraction of Chloroflexi (0- 2.6%).
       | 
       | It seems that it is the conditions that extends life since such a
       | diverse community of aerobes was "reanimated".
       | 
       | [1] https://www.nature.com/articles/s41467-020-17330-1
        
       | benmcnelly wrote:
       | Do you want zombies, this is how you get zombies... /kidding of
       | course(mostly)!
        
         | walterbell wrote:
         | But, but .. we did that in 1997-2005 for Spanish flu and
         | nothing (?) happened.
         | 
         | https://www.nature.com/articles/437794a
         | 
         |  _> It is thought to have killed 50 million people, and yet
         | scientists have brought it back to life ... Working out how it
         | arose and why it was so deadly could help experts to spot the
         | next pandemic strain and to design appropriate drugs and
         | vaccines in time, they say. But others have raised concerns
         | that the dangers of resurrecting the virus are just too great.
         | One biosecurity expert told Nature that the risk that the
         | recreated strain might escape is so high, it is almost a
         | certainty._
         | 
         | Grave digging: https://www.cdc.gov/flu/pandemic-
         | resources/reconstruction-19...
        
       | 42droids wrote:
       | It's 2020. What can go wrong?
        
         | amacbride wrote:
         | [gestures broadly at everything]
        
         | Zenst wrote:
         | with 2020 having less than 50% chance over 2021 of something
         | going wrong, I feel kinda upbeet. Maybe these microbes escape
         | and end up curing cancer!
        
         | ChuckMcM wrote:
         | It's like they have never read H.P. Lovecraft.
        
         | vz8 wrote:
         | Remember the Mayan calendar brouhaha over 2012? They just
         | forgot to carry the 1.
         | 
         | And here we are.
        
           | felipemnoa wrote:
           | Would have made a great movie. "The Mayans were off by 8
           | years"
        
             | nkrisc wrote:
             | I'm sure the Mayan's original paper they submitted for peer
             | review had the appropriate margins or error detailed, it
             | was just lost once the newspapers picked it up.
        
             | _Microft wrote:
             | Let me guess - it would begin like this: a scientist
             | sitting at their desk late at night (at home, old
             | furniture, bookshelves in the background, the table covered
             | with papers and scrolls, faint light of an desk lamp (green
             | lampshade?), maybe an open fire bickering offscreen)
             | suddenly grabbing a paper, looking closer, adjusting their
             | glasses, then starting to flip pages in a book, looking
             | again at the paper, covering their mouth with a hand,
             | jumping up, tapping a spot on the paper, rolling it up
             | before grabbing a coat from the coat rack, ...
        
         | detaro wrote:
         | Waking up ancients sleeping under the sea for aeons, sounds
         | perfectly safe to me.
        
       | est31 wrote:
       | I've heard that there is a hard limit of about 1 million years to
       | recover ancient DNA because of deterioration processes [1].
       | Wouldn't their DNA have deteriorated by now? Or is it being
       | constantly repaired?
       | 
       | [1]: https://en.wikipedia.org/wiki/Ancient_DNA
        
         | Knufen wrote:
         | You can 'reverse engineer' DNA. Though the DNA strand itself
         | deteriorates rather quickly given the time scales. The peptide
         | bond are extremely robust and can be used to recreate the
         | original DNA string or at least some semblance of it.
        
           | gus_massa wrote:
           | Some parts of the DNA are not transcribed, for example the
           | "Promoters" https://en.wikipedia.org/wiki/Promoter_(genetics)
           | They are important so some proteins are build only when the
           | they are needed. For a more concrete example, see
           | https://en.wikipedia.org/wiki/Lac_operon
        
         | Jabbles wrote:
         | It's probably being constantly repaired - though ofc I have no
         | knowledge of these particular microbes:
         | 
         | https://en.wikipedia.org/wiki/DNA_repair
        
         | senkora wrote:
         | They seem to speculate that the cells have been in a low-energy
         | state where they either divide very slowly or spend all of
         | their energy repairing broken molecules, which would presumably
         | include their own DNA.
         | 
         | My own (baseless) speculation: Maybe the population was
         | originally much larger, and the surviving cells have been
         | maintaining the energy to live by slowly cannibalizing each
         | other over millions of years?
        
       | tomcam wrote:
       | They don't look a day over 61 million
        
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       (page generated 2020-07-28 23:00 UTC)