[HN Gopher] My Mathematics PhD research workflow: LaTeX notes an...
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       My Mathematics PhD research workflow: LaTeX notes and instant pdf
       referencing
        
       Author : todsacerdoti
       Score  : 50 points
       Date   : 2022-04-10 20:51 UTC (2 hours ago)
        
 (HTM) web link (castel.dev)
 (TXT) w3m dump (castel.dev)
        
       | lallysingh wrote:
       | I wonder if those planning to stay in academia after grad school
       | are more willing to invest in their own tooling like this.
        
       | rcap wrote:
       | Author here, if you have any questions, feel free to ask them.
       | 
       | It really is amazing how hard it is just to retrieve the
       | currently opened pdf file and its page number in a pdf viewer.
       | Some pdf viewers (Like Zathura) provide this via DBus, but even
       | very common ones like Evince don't. I managed to find a way using
       | gvfs, although it's a bit of a hack.
       | 
       | For others (e.g. Mendeley), I have no idea on how to do this...
       | Anybody have ideas? it is Qt based, maybe I can hook into that
       | via some debugging tool?
        
         | 533474 wrote:
         | Try emacs and org-mode sometime. Configurability is off the
         | charts and vi keybindings are easily configurable (and so are
         | the snippets). I loved the workflow, I believe that a mind like
         | yours will also find emacs elisp captivating and I would love
         | to see what you could come up with in that much more flexible
         | ecosystem (I am a former Vim evangelist)
        
           | hollerith wrote:
           | What does org mode have to do with the problem where you have
           | a document open in a PDF viewer and you want to retrieve the
           | location of the document in the file system and what page is
           | currently showing in the viewer's window?
        
         | dancsi wrote:
         | I guess it will be easier to get it working with Zotero, as
         | it's open source, and I think it even supports custom plug-ins.
        
       | bryanph_ wrote:
       | Specifically being able to create a deep link to a passage is a
       | very powerful capability indeed. The friction required to look up
       | a paper and navigate to the specific passage for a given
       | reference can really be so high that we just end up avoiding it
       | altogether I feel. Kudos to you for trying to solve this problem!
       | 
       | I personally find LaTeX a little too friction-full (is that a
       | word?) on the input side. The output looks beautiful but the lack
       | of feedback when writing stuff keeps me from actually adding
       | stuff to it. Although your daily notes seems like it might help
       | with this tendency a little bit.
       | 
       | This is a problem I'm currently trying to solve with my current
       | project (https://topictrails.com/ if you're interested).
        
         | alan-hn wrote:
         | Personally for feedback I use editors like overleaf or the
         | extension for vscode that autocompilea and displays a PDF next
         | to the working TeX file. I prefer it over something like LyX or
         | waiting to compile manually.
        
       | adhesive_wombat wrote:
       | I just wish there was a good way to have something like Zeal[1]
       | for PDFs. Navigating a big pile of huge datasheets and manuals (a
       | processor TRM can be 5000 pages!) is such a huge pain and that's
       | assuming they have decent TOCs, which many do not.
       | 
       | [1]: https://zealdocs.org
        
         | gsatic wrote:
         | I use pdfgrep a lot.
         | 
         | Probably possible to convert pdfs to html (with the default pdf
         | tools on nix - pdftotext pdf2txt et al) and pull them into
         | zeal.
        
       | godelski wrote:
       | Does anyone have a good reference for Tikz? I feel like I'm
       | pretty good at it (at least better than most my peers) but I also
       | believe it takes a significant amount of time to create
       | interesting pictures and do even basic things that PPT or other
       | basic tools can do easily. I want the full editing power of tikz
       | but doing the basic parts is tough (same with manim, though lower
       | barrier to entry).
       | 
       | As for writing documents with lots of math, absolutely no
       | problem. I can churn that our faster than peers can with Word.
        
         | ivan_ah wrote:
         | The best way to TikZ is to copy-paste from previous figures
         | you've created.
         | 
         | The second best is to look for a similar figure on TeXample
         | https://texample.net/tikz/examples/ or stack overflow
         | https://tex.stackexchange.com/questions/tagged/tikz-pgf
         | 
         | The third best option is to use squared paper to draw by hand,
         | then transfer hand-drawn stuff into TikZ code. It's slow as
         | hell, but works well if you build up a collection of components
         | you can copy-paste into other figs later.
         | 
         | There are also some GUI tools you could try:
         | https://www.mathcha.io/
         | https://homepages.inf.ed.ac.uk/cheunen/freetikz/freetikz.htm...
         | https://tikzit.github.io/ etc. (more links in this thread
         | https://tex.stackexchange.com/questions/84890/does-there-exi...
         | )
        
       | hexomancer wrote:
       | You may also want to check out sioyek which is an open source PDF
       | viewer specifically designed for reading research papers and
       | textbooks.
       | 
       | https://github.com/ahrm/sioyek
       | 
       | Disclaimer: I am the developer of sioyek
        
         | [deleted]
        
       | retskrad wrote:
       | I looked at the math in the article and I asked myself, what
       | compels people to choose this path for their career? Nothing
       | about it looks appealing. It looks like a bunch of gibberish for
       | 99% of humanity and only 1% of people willingly go to school to
       | learn this stuff. I have a lot of respect for people who have
       | jobs involving this level of math and physics so dummies like me
       | have the ability to type out this comment.
        
         | MarcelOlsz wrote:
         | I've been trying to learn math for years but truly have no idea
         | where to begin. I started with Kiselev's Geometry and Gelfand's
         | Algebra. I used to hate Math. When I read Lockharts Lament some
         | years ago and it brought me to tears. Ever since then I've had
         | a big appreciation for it but no real time to get into it.
         | Gelfand's Algebra is really cool because it starts with the
         | most basic problems ever that a 3rd grader can do, and works
         | it's way up. It's worth checking out!
        
         | the_svd_doctor wrote:
         | Math for the sake of math can be very self fulfilling. Like an
         | intellectual hobby (it just takes a lot of work and energy).
        
         | Twisol wrote:
         | This only answers a small piece of your question, but it's
         | important to realize that the mathematical notation you see is
         | only how mathematics is recorded and communicated. Most of what
         | goes into _doing_ mathematics happens in your head.  "Doing"
         | mathematics requires you to know what the object of study is,
         | and what tools have historically been brought to bear on it,
         | and these are communicated and taught via notation. But once
         | you've internalized those concepts, the notation doesn't
         | usually play a significant role. Yes, you may trial your ideas
         | with some calculations, and once you're convinced of something
         | you need to prove it with some degree of rigor. But you don't
         | usually set out to prove something you don't already have some
         | reason to believe in -- it's not like the math workbooks you
         | may have encountered in school. (I second the sibling reply's
         | mention of Lockhart's Lament!)
        
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