[HN Gopher] Researchers' tests of lab-made version of Covid viru...
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       Researchers' tests of lab-made version of Covid virus draw scrutiny
        
       Author : russfink
       Score  : 171 points
       Date   : 2022-10-18 12:47 UTC (10 hours ago)
        
 (HTM) web link (www.statnews.com)
 (TXT) w3m dump (www.statnews.com)
        
       | derstander wrote:
       | The linked article mentions a BU response via email. There's also
       | one via the web [0]. The preprint is way outside of my field of
       | expertise so I can't confidently evaluate the news stories
       | against the preprint. But if journalists misinterpreted
       | scientific research it would certainly not be the first time.
       | 
       | [0] https://www.bu.edu/articles/2022/neidl-researchers-refute-
       | uk...
        
         | tripletao wrote:
         | That response is an exercise in obfuscation. For example:
         | 
         | > Corley says the line pulled out of context actually had
         | nothing to do with the virus' effect on humans. The study began
         | in a tissue culture, then moved to an animal model.
         | 
         | So they're saying we don't know if their lab-created chimera is
         | actually more dangerous in live humans, because they
         | (fortunately!) haven't tested in live humans. That completely
         | misses the point of those models, though--the reason why tissue
         | cultures and animals are used is that they're often predictive
         | of the effect in humans.
         | 
         | By that standard in their mice, their chimera is possibly less
         | deadly than the original Wuhan wild type, but definitely more
         | deadly than omicron. They didn't study the effect on
         | transmissibility, but we know that's determined mostly by the
         | spike.
         | 
         | So their chimera may combine most of the deadliness of the
         | Wuhan wild type with the transmissibility of omicron. We can't
         | prove that without experiments in live humans that I hope will
         | never be conducted, but that sure sounds like a gain of
         | function research of concern to me.
        
       | SSJPython wrote:
       | Why are we fucking with nature? Like literally what is the point
       | of this? To show that we can? Some fucked up biological arms race
       | with the other great powers?
       | 
       | When you fuck with nature, nature wins. Always.
        
         | shadowgovt wrote:
         | > When you fuck with nature, nature wins. Always.
         | 
         | There's, like, an entire human civilization on this planet
         | right now that begs to differ.
         | 
         | Ever been to Vegas? Not a single thing natural about that
         | place; it's been there over 100 years.
        
           | salawat wrote:
           | Do you not understand Nature does not operate on the same
           | timescales as humanity?
           | 
           | Do you realize that place's entire existence is predicated on
           | a _massive_ logistical network that if left untrnded for a
           | week would likely result in a completely inhospitable
           | environment for the residents?
           | 
           | Civilization as we know it is excruciatingly fragile, and
           | maintained by active expenditure of human energy. Nature, is
           | self'sustaining, closed loop, enthalpy decreasing and Just
           | Frigging Works. It just may take a while for us to
           | see/realize something that makes it click that, wow, nature
           | finds a way.
           | 
           | I'd think the modern hiccups in the supply chain recently
           | would have provided sufficient examples of how fragile the
           | entire artifice is...
        
             | shadowgovt wrote:
             | Nature isn't magic, and our species has exterminated enough
             | species and ecosystems to respect how fragile it is.
             | 
             | And while you speak of nature at large, we tend to care
             | more about subsets of it. Life, in the large, survived the
             | extinction of the dinosaurs, but a rock from space could
             | easily fuck with nature in a way that it wouldn't "bounce
             | back" in any way relevant to us.
        
               | rhacker wrote:
               | But that's also a major problem. We have deemed life so
               | unimportant, that if Russia wants San Francisco
               | obliterated tomorrow, they have the power to do that.
               | Literally nothing can stop them if they are hell-bent on
               | that, damn the consequences.
               | 
               | I think the only people that realize things like this are
               | those that have lost others. Perhaps by mistake even-
               | perhaps especially - his hand slipped and he is dead now.
               | Someone's wife out there is thinking that ALL the time.
               | Perhaps in a year we'll be mourning permanently for New
               | York like that.
        
       | obert wrote:
       | https://news.ycombinator.com/item?id=33244592
        
       | mgamache wrote:
       | "There is a lot of evidence that points to the virus spreading
       | from a wet market in the city"
       | 
       | Spreading, yes. Originating no. Note:
       | 
       | This article uses two preprint papers one of which was changed
       | before publication and the other doesn't support zoonotic origin:
       | 
       | https://www.science.org/content/article/do-three-new-studies...
        
       | giantg2 wrote:
       | Whether natural or escaping from a lab, I fully expect a mass
       | casualty disease in my lifetime. We saw what a shitshow covid
       | was, and it wasn't even _that_ bad.
       | 
       | Fast global travel is spreading the endemic ranges of many
       | diseases and make it essentially impossible to stop many diseases
       | depending on the traits of the disease.
       | 
       | A potential lab leak of many types of diseases is more of a
       | threat and will likely kill more people than a limited nuclear
       | deployment. At least with the nuclear issue someone has to push
       | the button. With the lab leak it's almost a certainty that
       | equipment will fail in some unprecedented way, or someone will
       | absent-mindedly violate protocol. It's a lot harder to keep track
       | of a microbe than a warhead.
        
         | bigdollopenergy wrote:
         | I don't think so. I think Covid was unique in that it occupied
         | a sweet-spot in it's severity. A more severe virus would play
         | out very differently. I don't think we'd see such a huge
         | conspiracy movement around it and much greater compliance from
         | the population.
         | 
         | The danger of the covid virus was concentrated in specific
         | demographics such that a lot of people didn't directly see how
         | dangerous it was. This created a disconnect between what was
         | being reported vs what people saw with their own eyes, creating
         | the perfect environment for conspiracy theories to run rampant.
         | For example, I don't know anyone that died or had a bad time
         | with it, nor does anyone else in my family/close circle. But
         | that's because I don't really know any old or medically
         | vulnerable people, but with our aging populations in the
         | western world this group is actually huge. We had people
         | dropping like flies in certain sub-groups while in others
         | nothing much happened and only where the groups intersected was
         | it visible how bad it really was (healthcare workers, people
         | with old grandparents not taking it seriously). It also doesn't
         | help that older demographics almost always have something else
         | wrong with them and Covid a lot of the time was one
         | contributing factor that pushed them over the edge, this really
         | fueled the conspiracy theorists narrative of falsely
         | attributing causes of death to "inflate" numbers.
         | 
         | I also think the media took a wrong turn in it's messaging and
         | told too many noble lies. It was really important that the
         | young and healthy also thought that this might be real threat
         | to them personally so they'd actually take it seriously and
         | stop spreading it. But young people would lookup the statistics
         | for their own risk and would see fatality/complication rates of
         | sub 1%, and also note that those affected were primarily the
         | morbidly obese and immuno-compromised. I recall seeing a lot of
         | articles indicating that there was a surge of young people in
         | ER and articles showing obituaries of young people in order to
         | hammer home the message that it was a real danger to them too.
         | The problem is the official statistics didn't back that message
         | up to the degree that it needed to, so you had this big
         | disconnect that was exploited heavily by conspiracy theorists.
         | IMO this was likely a misguided effort directed towards
         | reducing spread, because it was determined that quarantining to
         | save other people wasn't a strong enough incentive to curb
         | risky behavior (which is depressing), but backfired heavily and
         | likely caused more harm than good.
         | 
         | If a more serious virus came around that had fatality rates in
         | the double digits, I don't think conspiracy theories would be
         | able to form. Because very quickly people would see people they
         | know in their lives dying/becoming extremely sick. There's no
         | uncertainly/disconnect to exploit in that scenario like there
         | was with covid.
        
           | [deleted]
        
           | spookthesunset wrote:
           | > IMO this was likely a misguided effort directed towards
           | reducing spread, because it was determined that quarantining
           | to save other people wasn't a strong enough incentive to curb
           | risky behavior (which is depressing), but backfired heavily
           | and likely caused more harm than good.
           | 
           | Perhaps a large set of people have a different set of values
           | and consider the tradeoff between endless (and mostly
           | useless) lockdowns and restrictions not worth it compared to
           | taking their risks of getting covid.
           | 
           | Perhaps they have decided that the costs to society far
           | outweigh any benefits from these mitigations. These are a
           | perfectly valid set of values, just different than your own--
           | it requires absolutely no "conspiracy theories" to think
           | this.
           | 
           | > conspiracy theorists
           | 
           | There is not many conspiracy theories about covid and a very
           | small set of people peddle them. Most of the "conspiracy
           | theories" turned out to be perfectly true. For example
           | requiring proof of vaccination to sit down at a starbucks
           | turned out to be true. Vaccines turned out to do very little
           | to stop infection or transmission. Masks not working as well
           | as some people would like to believe. Lockdowns and school
           | closures hurt children--especially those who are low-income.
           | 
           | Writing off everything you disagree with as "conspiracy
           | theory" is poor intellectual thinking. Maybe if you put aside
           | your preconceived notions and dug harder into the arguments
           | people have against everything society has done for covid,
           | you'd discover that they have very valid points.
        
           | giantg2 wrote:
           | "A more severe virus would play out very differently."
           | 
           | It wouldn't necessarily. It could still be nearly impossible
           | to contain given the right characteristics, like asymptomatic
           | carriers, a latency period, or benign early onset symptoms.
           | With the right parameters and fast global travel, it would be
           | global before any measures could even be implemented (theory
           | is this was the case with Covid).
           | 
           | "I don't think we'd see such a huge conspiracy movement
           | around it and much greater compliance from the population."
           | 
           | There might be better compliance, but not likely enough to
           | make a difference. Many of the things that they're supposed
           | to be complying with were misunderstood, ineffective (maybe
           | marginally effective), and wouldn't prevent transmission.
           | Even if you were to lock almost everyone in their homes, you
           | still have some essential personnel who must travel/work/etc.
           | Most lack the training necessary for _consistently_ complying
           | with prevention protocols.
           | 
           | Just look at the number of people dying of drugs every year.
           | They know it's bad. Some think it won't happen to them.
           | Others don't care. There's no reason to believe that a non-
           | zero portion of the population would share these two thought
           | processes in this sort of situation and still cause
           | significant damage. Including the people who see no/limited
           | risk for themselves.
        
       | muaytimbo wrote:
       | This is an interesting case, making chimeras can always be
       | thought of as "gain-of-function" research because you really only
       | know if you succeeded after you've created and tested the new
       | organism, and there might be failures along the way if indeed
       | creating a more lethal organism is your goal.
       | 
       | In this case there is some handwaving about 80% mortality vs 100%
       | mortality in a mouse host about it technically not being more
       | lethal than the original. But what if the testing revealed 100%
       | mortality plus some other metric of increased transmissibility or
       | something similar after the fact. It would've been unknown to the
       | researchers at the time of synthesis and fit every definition of
       | "gain-of-function" research.
       | 
       | I think in light of this inability to know apriori if a virus is
       | going to be more/less lethal we're splitting hairs when we say
       | this is not technically "gain-of-function" research.
        
         | alchemist1e9 wrote:
         | Exactly. Lowe is using a really horrible argument, he is trying
         | to use the results to justify the experiment, but the entire
         | point is it was an experiment and they had no idea how it would
         | turn out. It's entirely possible it could have been 100% as the
         | result and that somehow this chimera found a spike mutation
         | that provided human immune escape and a lab worker was
         | accidentally infected as patient zero. It's not what happened
         | obviously but the idea he can use the experiments results to
         | justify the experiment is absurd. He is a dangerous apologist,
         | "it is difficult to get a man to understand something, when his
         | salary depends on his not understanding it".
        
           | muaytimbo wrote:
           | It's unfortunate because I like reading Lowe usually, but
           | these pieces that obfuscate and explain to us how we should
           | feel about something so obvious is telling.
        
       | nsxwolf wrote:
       | How there isn't a full on worldwide ban on this now is just
       | beyond me. Our hubris and overconfidence could kill millions
       | more.
        
         | thrown_22 wrote:
         | Biology research gives me nightmares. For the low price a an
         | undergraduate degree and a few tens of thousands of dollars you
         | can build a garage lab which can make something like covid in
         | your spare time.
         | 
         | In physics and chemistry you at least have to work hard for
         | your WMD. In biology you get them for free because you're not
         | careful enough.
        
         | shadowgovt wrote:
         | It may very well be riskier than not to ban research like that
         | on an endemic airborne virus that has shown a proclivity to
         | mutate.
         | 
         | If no humans are running controlled experiments on the virus,
         | there is still an experiment currently being run as a massive,
         | randomized trial in the form of the natural mutative processes
         | the virus undergoes in the infected human population. How much
         | do we want to trust that it won't hit upon an HIV-category
         | combinatoric mutation before we're aware it has the potential
         | to do that?
         | 
         | The risk tradeoff is difficult here, but we should keep in mind
         | that the risk of doing no such research is way, way higher than
         | zero.
        
           | AbrahamParangi wrote:
           | The current pandemic was probably caused by such research.
           | But even if you don't believe that it was _probably_ caused
           | by it, a reasonable person and can admit it was _possibly_ by
           | it. Multiply that "possibly" out by 6.5M deaths or so and
           | that's your research death toll.
           | 
           | So 1% chance of lab escape? 65,000 deaths. Weigh that against
           | your hypothetical benefits of performing the research and I
           | think it's hard to conclude that such research is wise.
        
             | shadowgovt wrote:
             | The 1918 flu involved no lab leak and killed [edit]: 50
             | million people.
             | 
             | I don't care for the game of fatality calculus, but if one
             | is going to play it, that's the enemy humanity is up
             | against.
        
               | AbrahamParangi wrote:
               | Your counterexample would need to be a positive instance,
               | not "other bad things also happen" and that evidence
               | would also need to be strong! Chemotherapy has many
               | terrible side effects but it helps kill cancer! With high
               | certainty!
               | 
               | You wouldn't subject people to chemotherapy if you lacked
               | _any_ evidence that it was helpful.
        
               | baja_blast wrote:
               | Yes, but how has the millions we have spent on collecting
               | and modifying wild coronaviruses helped us with this
               | pandemic. Despite over 100 years of technological
               | advancements and the virus is still impossible to stop!
               | So why do we want to risk creating new viruses when the
               | decades of research has proven to be such a colossal
               | failure?
        
               | shadowgovt wrote:
               | > impossible to stop
               | 
               | I don't think one stops a pandemic; IIUC, one gets out in
               | front of it with vaccination. Which we did, thanks to
               | previous mRNA research conducted on other viruses. GOF
               | research is one of the few ways we're aware of to get out
               | in front of vaccinating viruses that don't yet exist but
               | are probable to exist.
               | 
               | This argument treads suspiciously close to "Sometimes
               | people use fire to burn a house down, so why do we allow
               | cooking? People should only be allowed to use naturally-
               | occurring fires and not create new ones."
        
               | tsimionescu wrote:
               | mRNA research was mainly developed to fight cancers, not
               | viruses. To the extent that it was already being
               | researched to stop viruses, it was being tested on
               | existing viruses, not GOF-modified ones.
        
               | baja_blast wrote:
               | And what is the probability that out of the thousands of
               | viruses we identify the exact one that mutates in the
               | exact manner as researches induce in the lab? The
               | possible mutations a virus could take are astronomical,
               | and conditions in a lab using humanized mice models are
               | not something that would ever happen in the wild. Efforts
               | are better spent on surveillance not prediction!
               | https://media.nature.com/original/magazine-
               | assets/d41586-018...
        
               | jpeloquin wrote:
               | Your article actually argues in favor of the type of
               | research BU was doing because it's being done post-
               | outbreak: "Once an emerging outbreak virus has been
               | identified, it needs to be analysed quickly to establish
               | what type it is; which molecular mechanisms (such as
               | receptor type) enable it to jump between individuals; how
               | it spreads through human populations; and how it affects
               | those infected In other words, at least four kinds of
               | analysis are needed: genomic, virological,
               | epidemiological and clinical.". BU's work is in the
               | genomic and virological categories and addresses the kind
               | of questions the article wants addressed as part of a
               | surveillance strategy.
               | 
               | The article strongly opposes making predictions of
               | whether a pathogen will be pandemic because predictions
               | are a rigged game. There are enough factors that you are
               | very unlikely to be correct, and even then a true
               | positive combined with successful mitigations erodes
               | public trust because "the severity of the virus had been
               | overblown". Geologists avoid making predictions of
               | volcanic eruptions or earthquakes for similar reasons.
               | 
               | It is not directly opposed to study of pre-pandemic
               | animal pathogens: "Surveys of animals will undoubtedly
               | result in the discovery of many thousands of new viruses.
               | These data will benefit studies of diversity and
               | evolution, and could tell us whether and why some
               | pathogens might jump species boundaries more frequently
               | than others." This makes sense, because study of pre-
               | pandemic pathogens is needed to set a foundation such
               | that the post-outbreak analysis the article wants us to
               | focus on can be completed in a reasonable time frame.
               | 
               | The article is arguing for rapid response and against
               | predictions. It's not opposed to basic research of
               | pathogens, and actually supports this specific type of
               | research.
        
               | [deleted]
        
               | giantg2 wrote:
               | I thought it was more like 50 million?
        
               | shadowgovt wrote:
               | Thank you and good catch; I quoted the infection number
               | where I meant to quote the estimated fatalities.
        
             | rhacker wrote:
             | Well you have to include excess deaths which is at 15M or
             | higher. The reason is that even if you are including drug
             | overdoses, the pandemic was still a catalyst for
             | homelessness and... excess deaths. Covid is still
             | responsible.
        
           | giantg2 wrote:
           | I think there's a difference between studying existing
           | viruses, or even their natural mutations, and _engineering_ a
           | virus to be more potent (and not in the highest level lab
           | even).
        
           | nsxwolf wrote:
           | I find this very frustrating. If COVID-19 was a lab leak -
           | wether it had involved gain of function related or just
           | unwisely moving viruses from the animal kingdom into human
           | spaces - what good did any of it do?
           | 
           | Apparently our ability to create vaccines doesn't hinge on
           | messing around with the viruses before they infect humans.
           | COVID-19 vaccine was created after the fact, and it hardly
           | prevented a major global catastrophe.
           | 
           | I just don't see the argument. It sounds like pure
           | imagination - by making viruses more dangerous or increasing
           | the odds we'll expose ourselves to novel ones, someday we'll
           | have the technology to prevent any pandemic. How many
           | millions of lives lost and trillions of dollars wasted before
           | that happens? When is it just not worth it? It seems not
           | worth it to me now.
           | 
           | If it's a bioweapons program, I don't see why we need to be
           | playing along. It's not like nuclear deterrence - someone
           | releases a weaponized virus, the whole world gets infected.
           | It's like a nuke that blows up the entire world.
        
             | brippalcharrid wrote:
             | The treaties in place to restrict biological weapons have
             | exclusions that permit the development (and use) of
             | incapacitating agents. The DoD/NIAID/Daszak/Fauci model has
             | been that a hostile nation would release a biological
             | weapon that would compromise the ability of members of the
             | Armed Forces to engage in combat operations over a period
             | of months or years, and to address this they had planned to
             | be able to quickly marshal a new transfection to induce
             | neutralising antibodies [in the relevant groups before they
             | were deployed to combat zones], hence the focus of research
             | into these particular areas from the defence establishment
             | and its partners over the last few decades.
        
             | CamperBob2 wrote:
             | _I find this very frustrating. If COVID-19 was a lab leak -
             | wether it had involved gain of function related or just
             | unwisely moving viruses from the animal kingdom into human
             | spaces - what good did any of it do?_
             | 
             | If the increased focus on mRNA vaccine research due to the
             | COVID outbreak leads to successful new anticancer
             | therapies, we could make up for the COVID death toll in a
             | hurry, and benefit enormously from subsequent availability.
             | 
             | In no event is "don't research this, it's too scary" ever
             | the right answer. The question is how to do it safely. For
             | instance, I don't understand why gain-of-function research
             | is less regulated than, say, nuclear research. The work
             | needs to happen, but our risk assessments are hopelessly
             | out of whack.
        
               | nsxwolf wrote:
               | The pandemic forever cured me of my willingness to
               | participate in Trolley Problems. I would say harming
               | people over some vague future promise of helping them is,
               | from this point forward, always the wrong decision.
        
             | darkarmani wrote:
             | > COVID-19 vaccine was created after the fact, and it
             | hardly prevented a major global catastrophe.
             | 
             | What? It immediately dropped the death rate. How many more
             | millions of lives would it have to have saved to get
             | notice?
        
               | creato wrote:
               | Knowing about the virus ahead of time wouldn't help much.
               | By far the most expensive (in time and money) part of a
               | publicly available vaccine is testing it. It is
               | _impossible_ to test a vaccine under any reasonable
               | procedure we have today before the virus is a full blown
               | pandemic.
               | 
               | The best case scenario for putting this kind of research
               | into practice is saving two weeks off a months or years
               | long development schedule. It might not even work.
               | Frankly the risk reward trade off here is so laughably
               | bad that I can't understand why it's even a debate.
        
             | hotpotamus wrote:
             | I would say that viruses, like a lot of other aspects of
             | life, are chaotic and capricious both in their evolution
             | and their affects on an individual humans (COVID really
             | drove that home for me in that it killed some and was
             | asymptotically carried by others).
             | 
             | But we demand explanations where there are none, and so we
             | create them ourselves or accept them from others.
        
             | baja_blast wrote:
             | Additionally, in the same way a banana would never occur in
             | nature, many of these experiments researchers conduct are
             | extremely unlikely or out right impossible. For wild
             | viruses crossing over to humans it needs to go through many
             | mutations and people before becoming adapted and highly
             | infectious towards humans. But in a lab you can insert the
             | exact mutation to make it highly infectious towards humans
             | without having to mutate. For example right now the bird
             | flu which can infect humans who have ingested bird
             | droppings, but it can't spread human to human.
             | 
             | The conditions in the lab are just so artificial the
             | predictive power is practically worthless, especially when
             | you consider the massive possibility space. Just like you'd
             | never find something like a banana evolve to it's current
             | state in the wild, you would won't find these viral
             | chimeras just popping up out of no where.
        
               | rhacker wrote:
               | The other thing too is that were just going to do ACE2
               | receptor research from now til the next pandemic, which
               | I'm sure will have NOTHING to do with ACE2.
        
               | throwaway4aday wrote:
               | Remember this?
               | 
               | "H5N1 is a type of avian flu virus that occurs naturally
               | in various types of birds but has surfaced in humans in
               | the last ten years. Although human cases of H5N1 are
               | rare, the virus has a 60% mortality rate."
               | 
               | "They reasoned that it'd be better to tinker with H5N1 in
               | the lab and gain knowledge for its prevention than sit
               | back and wait for mother nature to concoct a human-
               | friendly strain. Both teams of researchers artificially
               | mutated H5N1 to spread easily amongst ferrets. Ferrets
               | are commonly used as stand ins for humans in influenza
               | studies. To clarify what I mean by "easily" spread, at
               | the end of Fouchier's study the strain had gained the
               | ability to transmit through the air- an unprecedented
               | feat!"
               | 
               | https://www.nature.com/scitable/blog/viruses101/avian/
        
             | shadowgovt wrote:
             | > Apparently our ability to create vaccines doesn't hinge
             | on messing around with the viruses before they infect
             | humans.
             | 
             | The COVID vaccine built heavily on previous research with
             | flu,. Zika, rabies, and cytomegalovirus.
        
               | RcouF1uZ4gsC wrote:
               | > The COVID vaccine built heavily on previous research
               | with flu,. Zika, rabies, and cytomegalovirus.
               | 
               | All viruses that are already around. Agree that creating
               | novel viruses is not with the risk.
        
         | matthewdgreen wrote:
         | These "convergent mutation" variants seem to be arriving at a
         | rapid pace, all by themselves without researchers helping (some
         | hypothesize this is due to virus replication in
         | immunocompromised patients.) [1] Since these mutations seem
         | capable of repeatedly emerging, we should understand what they
         | do, both alone and in combination. The cost here is that yes,
         | researchers could make and release a new deadly variant. On the
         | other hand it's just as likely that something very similar will
         | pop up through natural evolution in the next few months. When
         | that happens we can be clueless or we can be armed with
         | knowledge.
         | 
         | [1] https://www.fiercehealthcare.com/payers/preliminary-data-
         | poi...
        
           | baja_blast wrote:
           | And how did our decades of Coronavirus research help us
           | prevent/fight this last pandemic? Given the fact it was
           | already known at the time that the spike protein on SARS2 was
           | what researchers have been using to attach to wild viruses so
           | infect humanized mice/cell cultures via the ACE2 receptor we
           | should have already known that Airborne H2H transmission was
           | possible!
        
             | shadowgovt wrote:
             | > And how did our decades of Coronavirus research help us
             | prevent/fight this last pandemic?
             | 
             | IIUC, the vaccine was synthesized in record time, was it
             | not?
        
               | baja_blast wrote:
               | the MRNA vaccine had nothing to do with the research
               | involving modifying wild coronaviruses. The technology
               | was originally built independently and for different
               | reasons, but there was a MERS vaccine they developed and
               | modified for SARS2, but again that was for an existing
               | known virus. The type of research Ecohealth conducted
               | contributed absolutely nothing to the development of the
               | vaccine.
               | 
               | In fact Ecohealth didn't even share their research of any
               | data with anyone since the pandemic began. So the value
               | of the risky research is dubious.
        
             | matthewdgreen wrote:
             | We've had very little GoF research, in large part because
             | it's controversial. There have been several outright bans,
             | and the issue is so emotional that many scientists probably
             | avoid it just because the costs are high.
             | 
             | I am not necessarily in favor of GoF research, but I
             | recognize a broken argument when I see one. In the face of
             | a clear policy preference to dissuade GoF work, the
             | question "why didn't [the very limited GoF work that we
             | allowed to take place] produce huge numbers of beneficial
             | results" isn't really an interesting question about the
             | usefulness of the research, since it might just as easily
             | reflect a (known) pre-existing policy bias.
             | 
             | We're in a rapidly-developing new era and have just seen
             | clear evidence of how devastating a pandemic can be. The
             | question we should be asking is whether we're using every
             | tool at our disposal to defend ourselves from the next one,
             | and that requires some careful and dispassionate weighing
             | of risks/rewards. The arguments I see don't meet that
             | standard _at all_.
        
         | Loughla wrote:
         | On what? Virus research?
        
           | nsxwolf wrote:
           | Yes. Fucking around with viruses and deliberately making them
           | more dangerous. This isn't like math research.
        
             | Loughla wrote:
             | So how do you suggest we plan for the future and try to
             | solve problems with viruses before they occur without
             | research?
        
               | [deleted]
        
               | tsimionescu wrote:
               | By doing what we did with the Covid vaccine: fucking
               | around with treatments against existing wild viruses.
               | There's plenty of viruses out there, there is 0 reason to
               | engineer our own to try to fight (there are reasons to
               | engineer our own viruses for other kinds of genetic
               | research, but that's a different discussion).
        
               | [deleted]
        
               | [deleted]
        
       | jacknews wrote:
       | 'Ask for forgiveness, not permission' is really not something we
       | want in biotech.
        
       | dirtyid wrote:
       | Seems like this kind of work, if deemed neccessary, should at
       | least be done somewhere remote.
        
       | marshray wrote:
       | It's not the possibility that a simple lab accident could kill a
       | billion people, the headline is that it "draws scrutiny".
        
       | snshn wrote:
       | Humanity has peaked sometime around 1960s-1980s, it's all been
       | downhill since then. My theory is that we're in a self-
       | destructive mode now. The technology we possess keeps advancing
       | while our control over it and intellectual abilities are
       | diminishing, partially because we rely on tech so much
       | (smartphones, automation, "AI"). So in retrospect, we were meant
       | to go (mostly) extinct during the cold war, by some miracle it
       | was narrowly avoided, so we survived past our peak, and now we're
       | just existing on borrowed time, the whole planet is a ticking
       | time bomb, and the question is if we manage to become multi-
       | planetary species before then or go (mostly) extinct. I think
       | Elon has the same view on things, that would explain Neuralink,
       | Starlink, SpaceX.
        
         | mikkergp wrote:
         | > Humanity has peaked sometime around 1960s-1980s
         | 
         | I'm 99% certain they would have said the same things in the
         | 60's to 80's about the 20's to 40's (maybe stopping somewhere
         | around 1939) and in the 20's they would certainly be
         | reminiscing about the industrial revolution and gilded age.
        
         | simple-thoughts wrote:
         | If by "humanity" you mean the United States' population,
         | possibly. But for most people in most countries, life is much
         | better today than in the 1980s.
        
       | seattle_spring wrote:
        
       | photochemsyn wrote:
       | In this snippet from the abstract, S stands for spike protein:
       | 
       | > "We generated chimeric recombinant SARS-CoV-2 encoding the S
       | gene of Omicron in the backbone of an ancestral SARS-CoV-2
       | isolate and compared this virus with the naturally circulating
       | Omicron variant. The Omicron S-bearing virus robustly escapes
       | vaccine-induced humoral immunity, mainly due to mutations in the
       | receptor-binding motif (RBM), yet unlike naturally occurring
       | Omicron, efficiently replicates in cell lines and primary-like
       | distal lung cells. _In K18-hACE2 mice, while Omicron causes mild,
       | non-fatal infection, the Omicron S-carrying virus inflicts severe
       | disease with a mortality rate of 80%._ This indicates that while
       | the vaccine escape of Omicron is defined by mutations in S, major
       | determinants of viral pathogenicity reside outside of S. "
       | 
       | https://www.biorxiv.org/content/10.1101/2022.10.13.512134v1....
       | 
       | See russfink comment above for the relative mortality compared to
       | the original Wuhan strain (100% for Wuhan compared to 80% for
       | this hybrid). So this researcher-generated strain appears to be
       | intermediate in mortality between the original Wuhan strain and
       | Omicron, BUT _it escapes vaccination relative to the Wuhan
       | strain, making it more dangerous in that regard and more likely
       | to spread through a vaccinated population causing significant
       | mortality._ I 'd classify this as reckless and irresponsible
       | research.
       | 
       | As far as the original Wuhan strain, we have about four theories
       | of origin. (1) natural wild type with no lab research
       | involvement, (2) natural wild type collected by a lab and
       | accidentally released from that lab, (3) wild type 'heated up' by
       | serial passage through mice and cloned human-type cells without
       | explicit genetic engineering, and (4) deliberate engineering
       | using a CRISPR system to insert a furan cleavage site in a
       | collected wild-type virus, which allowed a bat virus to leap to a
       | human host.
       | 
       | Really (4) has the most evidence at this point, and note that
       | this is not entirely the fault of the Chinese Wuhan Institute of
       | Virology as the research concept was partially developed in the
       | USA and continued (despite an Obama-era ban on gain-of-function
       | research) in China with Ecohealth Alliance funding.
       | 
       | As far as why doing gain-of-function research to predict
       | 'emerging disease outbreaks' is a godawfully stupid idea, it's
       | that it appears that almost any infectious animal virus can be
       | converted to a human pathogen by selective transfer of human-
       | receptor-binding motifs, even though such transfer would never
       | take place under natural conditions. An immediate global ban on
       | this kind of research (under the Biological Warfare Convention)
       | is needed.
        
         | lamontcg wrote:
         | > Really (4) has the most evidence at this point
         | 
         | No, there is literally zero evidence of this.
         | 
         | The BANAL viruses are a couple of mutations away from a
         | workable furin cleavage site, nature can engineer them just as
         | easily as we do, and has done so multiple different times that
         | we know of across beta-coronaviruses.
        
           | tripletao wrote:
           | > The BANAL viruses are a couple of mutations away from a
           | workable furin cleavage site,
           | 
           | That's true, but you can argue it in either direction. It
           | proves the mutations to create that FCS are possible and
           | indeed likely; but it also proves they're selected against in
           | their usual hosts, or else we'd have observed the complete
           | FCS. So you need the mutation to happen concurrently with the
           | species jump (or in a yet-undiscovered intermediate host),
           | which gets less likely.
        
             | lamontcg wrote:
             | > it also proves they're selected against in their usual
             | hosts
             | 
             | No it doesn't. They can be neutral. And BtCoV-HKU5 is a
             | MERS-like bat coronavirus with a functional FCS and
             | BtHpCoV-ZJ13 is even closer to sarbecoviruses than MERS and
             | is another bat coronavirus with an FCS. It is more likely
             | that the absence of an FCS in BANAL-like viruses is due to
             | us not having found them yet, our surveillance coverage is
             | immeasurably poor.
             | 
             | And a species jump involving coinfection with proto-SARS-
             | CoV-2 and some other coronavirus and a recombination event
             | is actually a likely way to start a pandemic. The 2009 H1N1
             | pandemic was started by a triple reassortment with three
             | viruses in a pig. Pandemics are very uncommon infection
             | events so the conditions that create them are necessarily
             | highly unlikely.
        
         | shadowgovt wrote:
         | > such transfer would never take place under natural conditions
         | 
         | How confident are we that is the case?
         | 
         | HIV resulted from the fusion of, IIRC, three virii in a host
         | animal.
         | 
         | The odds of any single such event are vanishingly small, but
         | that stacks against how many cells per second a virus can
         | infect, worldwide. Life is a _frightening_ goodness-of-fit
         | optimizer at the scale of microorganization.
        
           | mgamache wrote:
           | It would never take place between animals that don't
           | naturally cohabitate.
        
           | photochemsyn wrote:
           | Studying rare historical accidents of evolution that resulted
           | in pandemics to see how they took place is one thing, but
           | creating hundreds of such accidents of evolution deliberately
           | to see how many novel deadly pathogens one can create is
           | quite another.
           | 
           | In the case of HIV:
           | 
           | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3234451/
           | 
           | Now, should we start taking all the viruses known to infect
           | every species of squirrel, rat, monkey, gorilla and
           | chimpanzee and start splicing in motifs that bind, say, the
           | top 100 most common human cell-surface receptors in order to
           | see what's the most dangerous virus - with the optimal mix of
           | mortality and transmissibility (R factor) - we can create,
           | the one best able to cause a global human pandemic? That's
           | insane, and there's no justification for it.
        
             | shadowgovt wrote:
             | Is that research done? I don't think that's an accurate
             | description of gain-of-function research; I thought it was
             | more focused than "just throw everything in a beaker and
             | see what happens." I agree that's a bad idea.
        
               | tsimionescu wrote:
               | It's more focused exactly in the sense that it is
               | specifically targeting known-dangerous characteristics -
               | hence _gain_ of function: they 're aiming to increase the
               | virus' ability to do something.
        
           | throwaway43903 wrote:
        
       | alfiedotwtf wrote:
       | Why have one pandemic when you can have two pandemics for twice
       | the price
        
       | flobosg wrote:
       | See also Derek Lowe's article about the preprint:
       | https://www.science.org/content/blog-post/gain-function-not-...
        
       | russfink wrote:
       | Some snippets:
       | 
       | The spike protein of an Omicron version of SARS-2 was fused to a
       | virus of the Wuhan strain, the original version that emerged from
       | China in 2020. The goal was to determine if the mutations in the
       | Omicron spike protein were responsible for this variant's
       | increased ability to evade the immunity to SARS-2 that humans
       | have built up, and whether the changes led to Omicron's lower
       | rate of severity. The testing actually showed, though, that the
       | chimeric virus was more lethal to a type of lab mice than Omicron
       | itself, killing 80% of the mice infected. Importantly, the
       | original Wuhan strain killed 100% of mice it was tested in. The
       | conclusion is that mutations in the spike protein of the Omicron
       | variant are responsible for the strain's ability to evade
       | immunity people have built up via vaccination, infections, or
       | both, but they are not responsible for the apparent decrease in
       | severity of the Omicron viruses.
        
         | cstejerean wrote:
         | If it went from 100% IFR (original strain) to 80% IFR (Original
         | + Omicron spike) how did it not reduce the severity? Sure it's
         | more severe than Omicron by itself so there were other factors
         | as well, but it does seem like a decrease in severity to me.
        
           | xyzzy123 wrote:
           | The researchers could not be sure of this result before they
           | did it, which is why I believe there's a reasonable case this
           | should be considered GOF work even if the lethality of their
           | chimera (in hu mice) was ultimately less than that of
           | original strain.
           | 
           | Furthermore, strictly speaking I don't believe we know the
           | actual severity of this in humans. While it's possible to
           | make a fairly confident guess, surprises are still possible.
        
           | algon33 wrote:
           | Because it has Omicron's increased ability to avoid people's
           | immunity. That would result in higher infectivity than just a
           | copy of the wuhan strain, with near the same severity. Note
           | that earlier Sars viruses had even higher severity than Sars
           | Covid 2 (Wuhan strain), but weren't as infective and killed
           | far fewer people. Which implies that a slight reduction in
           | severity for a gain in infectivity is not a worthwhile
           | tradeoff.
        
             | baja_blast wrote:
             | Exactly, for example Ebola has a mortality rate of around
             | 50% but has only killed around 11 thousand people, SARS-
             | CoV2 has less than 1% can has killed 20 million or more.
             | Wild viruses like SARS1 and MERS are poorly adapted towards
             | humans when the spillover happened making it possible to be
             | contained. But SARS2 a which is a Sarbecovirus a family of
             | gastrointestinal viruses some how was able to bind towards
             | human airways with a binding affinity 20 times that for
             | humans than for bats, all while leaving no traceable trail
             | of mutations that researchers could trace back to the
             | intermediate host.
             | 
             | For context with SARS1 and MERS researchers were able to
             | find the spill over animal within a few months. But after
             | 3+ years we have yet to find an intermediate animal host.
             | Also before anyone says "It took years to find the source
             | for SARS1", but that is for the original bat virus, the
             | intermediate animal where the cross over to humans happened
             | was found within months. Additionally SARS1 and MERS had a
             | rapid period of mutations as it adapted towards humans
             | which allowed researchers to trace back to the source.
        
           | thehappypm wrote:
           | Errorbars, probably. 80% and 100% might be samples of a true
           | death rate of 90%.
        
             | Izkata wrote:
             | Indeed, beware of round numbers, they tend to indicate very
             | low sample size and very large error range.
        
       | rossdavidh wrote:
       | 1) talk about failure to read a room
       | 
       | 2) even the alleged learning from the experiment: "The conclusion
       | of the study is that mutations in the spike protein of the
       | Omicron variant are responsible for the strain's ability to evade
       | immunity people have built up via vaccination, infections, or
       | both, but they are not responsible for the apparent decrease in
       | severity of the Omicron viruses."
       | 
       | ...does not hold up, because this was in mice. Ordinary lab rats
       | were immune to the original strain of covid-19, but not to
       | Omicron, which shows that it is not at all unlikely for there to
       | be significant differences in the resistance of rodents to one
       | strain or the other, compared to humans.
       | 
       | So, they made a hybrid covid-19 strain, that could conceivably
       | have been as contagious as Omicron but as lethal as the original
       | strain. Nice work, folks.
        
         | brundolf wrote:
        
         | stuckinhell wrote:
         | This alone has convinced me, these scientists need to be
         | investigated and punished for biological terrorism. This
         | represents an insane lack of ethics. Did they forget, we've
         | been in a multi-year pandemic lockdown.
        
           | saiya-jin wrote:
           | Lets not forget some estimated 16 million dead, that puts one
           | among such peers like Mao, Stalin and Hitler
        
         | bayesian_horse wrote:
         | The result of the research is very valuable. It helps predict
         | the attributes of future novel strains.
         | 
         | In reality, infectious success and malignancy are highly anti-
         | correlated, strongly. The combined Virus (which probably has
         | existed in a very similar form in the wild somewhere!!) is
         | actually a lot less dangerous than the two sources.
         | 
         | Also: Both Viruses have become a lot less dangerous to the
         | world population because of immunity.
        
           | MichaelCollins wrote:
           | > _It helps predict the attributes of future novel strains._
           | 
           | Prove it.
        
           | creato wrote:
           | Why is that valuable? It takes weeks if not days to
           | synthesize a vaccine for a new strain. It then takes months
           | if not years, and massive investment, to test it for safety
           | and efficacy. How the hell does shortening the weeks part of
           | this at the expense of potentially requiring a new expensive
           | test, in case the experiment leaks, make any sense?
        
             | bayesian_horse wrote:
             | Creating a vaccine was not the purpose of this research.
             | 
             | The problem with new variants is that it takes months to
             | know how virulent and how transmissible it is. Such
             | research enables better prediction from the point of
             | detecting and sequencing such variants.
             | 
             | We know now that Omicron's spike protein is responsible for
             | the better transmission and better immunological evasion.
             | If we see a new variant with Omicron's spike protein, but
             | modified, we can first of all tell it's going to be better
             | at evasion. If there are changes in parts that are highly
             | selected, it's probably more transmissive. If that part is
             | less selected-for (there are ways to tell from the
             | sequence) we have a clue that it is probably a little less
             | transmissive. We also know that the spike protein is less
             | associated with the virulence. Which means researchers have
             | to keep looking for what makes the Virus deadly. This could
             | lead to more effective vaccines and antibody treatments or
             | even antiviral agents. Knowing which protein to target is
             | half the game.
        
         | thrown_22 wrote:
         | > 1) talk about failure to read a room
         | 
         | The people most upset in the room are the same people who have
         | been screaming that Covid was not a lab accident. I wonder why
         | they would be upset at someone showing how easy it is to
         | weaponize a coronavirus?
        
         | alexfromapex wrote:
         | I think the other part that is appalling is they did this in
         | Biosafety Level 3 labs instead of 4 when COVID has basically
         | brought the entire world to its knees for 3 years. What is
         | wrong with the biosafety review committee?
         | 
         | Also, they completely skirted the NIAID approval process,
         | putting the public at risk, will anyone see jail time for that?
        
         | baja_blast wrote:
         | Well the mice the researchers used were genetically modified
         | mice to have human ACE2 receptors which is standard practice in
         | Virology. But! I will say it 100% is not worth the risk, just
         | last year a researcher in Taiwan got infected with the delta
         | variant in the same level lab BSL3, so any dangerous or novel
         | virus they create has a real possibility of escaping.
         | 
         | Also it's not like this type of research helped us predict or
         | even fight the pandemic. Millions have been spent on studying
         | and modifying wild coronaviruses and it not only failed to
         | predict this pandemic, but none of the research helped in
         | anyway combating it. For example the Ecohealth Alliance the
         | main collaborators with the WIV has still to this day refused
         | to share research and data they have collected over the years.
         | So either the research is worthless and thus why are we funding
         | it despite the dangers, or they have something they want to
         | hide.
        
           | heavyset_go wrote:
           | > _Also it 's not like this type of research helped us
           | predict or even fight the pandemic. Millions have been spent
           | on studying and modifying wild coronaviruses and it not only
           | failed to predict this pandemic, but none of the research
           | helped in anyway combating it._
           | 
           | I was under the impression this research was partly
           | responsible for quickly identifying parts of the virus that
           | are conserved in evolution, thus making them good targets for
           | mRNA vaccines. If vaccine manufacturers had targeted proteins
           | that have high rates of mutation, it would allow the virus to
           | evade vaccine immunity faster, potentially making vaccines
           | useless by the time they were actually rolled out.
        
             | Izkata wrote:
             | The spike protein was selected because the virus was
             | already well-adapted to humans and they _assumed_ changes
             | to the spike protein would make it less-fit and not able to
             | infect as readily. They were wrong.
             | 
             | > If vaccine manufacturers had targeted proteins that have
             | high rates of mutation, it would allow the virus to evade
             | vaccine immunity faster, potentially making vaccines
             | useless by the time they were actually rolled out.
             | 
             | This is what happened - the variant later named Delta was
             | first identified in Oct 2020, long before the vaccines were
             | released. If anything the vaccines helped it become the
             | dominant one.
        
           | bayesian_horse wrote:
           | This particular research helps to understand how important
           | this particular variant of the spike protein is.
           | 
           | When future virus variants are discovered and sequenced, this
           | information helps understand what to expect. Because the
           | virulence of new Variants can't be estimated for months after
           | their first detection.
        
             | rossdavidh wrote:
             | If this research does help us to understand that, it should
             | be done in the highest level safety protocol labs, which
             | this was not.
             | 
             | If it is not able to get funding for being done in such a
             | lab, that's probably because the potential learning does
             | not justify such $$ cost. Which means it's also not worth
             | the risk.
             | 
             | You are correct that the virulence of new variants is hard
             | to predict. That very fact means you shouldn't be making
             | new ones, and assuming you can predict how virulent your
             | new one is going to be (and thus how hard it will be to
             | contain).
        
             | TechBro8615 wrote:
             | This particular variant that didn't exist until humans
             | combined two variants into a new one?
        
               | clint wrote:
               | Which is simulating what could and probably will happen
               | in nature, before it really happens
        
               | JamesBarney wrote:
               | Or could cause it to happen. There's still a decent
               | chance the original covid wouldn't have happened if
               | people weren't doing this type of research.
        
               | bayesian_horse wrote:
               | There is zero indication of the Virus having originated
               | in a lab. Some hand-waving, no actual evidence. No
               | genomic signature. No merging of known lineages (which
               | would happen). No plausible mechanism (to those who know
               | the subject).
               | 
               | Much more likely: This Virus originated just like the
               | thousands before it. From ordinary Human-to-animal
               | contact. Virus particles pass from animals to Humans
               | trillions of times a year. Most of the time exactly
               | nothing happens at all. Even rarer are actual
               | transmissions. Still rarer are chains of transmission
               | that allow the Virus to evolve into an actual threat.
        
               | JamesBarney wrote:
               | How would we know if there would be a genomic signature
               | if the database of viruses Wuhan worked with wasn't
               | opened up?
               | 
               | There is not plausible mechanism for anyone from the
               | Wuhan laboratory to get sick with a virus they are
               | studying? This happened several times, and happens 100's
               | of times a year (not Wuhan specifically but labs).
               | 
               | There is some circumstantial evidence it was a lab leak.
               | Like the virus doesn't naturally occur in the Wuhan
               | district, and the Wuhan Institute of Virology is one of
               | the few in the world that study coronaviruses and do gain
               | of function research. Unlike SARS and MERS where we
               | discovered the origins quickly, we still don't know the
               | origins of covid-19. I don't know how you leap to the
               | conclusion it was of natural origins when we don't even
               | know what those natural origins are.
               | 
               | We don't know if it's a lab leak or not, but they do
               | happen and they've fairly common. (10's-100's per year)
        
               | buscoquadnary wrote:
               | I love how everyone involved always jumps on the most
               | extreme version of the lab leak hypothesis "Chinese
               | government made COVID super weapon" and then use that to
               | discount everything else instead of admitting the much
               | more nuanced reality of the situation.
               | 
               | The lab leak hypothesis has a range from "This virus was
               | created and released by the Chinese government as a bio-
               | weapon against the US and to kill off their own aging
               | population" at the extreme. To the "The virus was being
               | studied at the Wuhan Virology Institute and someone one
               | got lax on safety protocols got exposed accidentally and
               | then took the train home."
               | 
               | Most people that seem to argue against lab leak, seem to
               | assume everyone ascribes to the first position, whereas
               | the majority of the people that believe in the lab leak
               | subscribe to the later position, including myself.
        
               | dTal wrote:
               | Except it's not a simulation, it is _causing_ it to
               | "really happen". The _only_ difference hinges on the
               | ability of human institutions to keep it contained, which
               | at the very least we have reason to be concerned about.
        
               | bayesian_horse wrote:
               | A pandemic virus circulating in the wild is an incredibly
               | fine-tuned machine. Just mashing together integral parts
               | from two quite different genomes is not going to result
               | in a Variant that is tuned enough. In order to make a
               | Virus virulent and transmissive, it needs to evolve
               | through multiple, probably dozens of hosts, and only if
               | that is on a broad scale, like thousands of such
               | lineages, does it have a chance of success.
               | 
               | Even one lab leak isn't enough. The Virus would most
               | likely die out on its own, if not it would get
               | outcompeted by naturally developing variants. The risk of
               | a lab leaking a variant in a way that it would outcompete
               | natural strains is so miniscule compared to natural
               | variants arising and doing the same, it's not worth
               | mentioning.
        
               | reuben_scratton wrote:
               | You must know that virologists routinely "serial passage"
               | viruses through animal hosts? Evolving a candidate virus
               | "through multiple, probably dozens of hosts" is what
               | virology labs _do_.
               | 
               | And lab leaks happen All The Time. SARS-1 escaped labs on
               | six separate occasions.
        
               | d0mine wrote:
               | Do we have definite proof that the original SARS-CoV-2
               | hasn't escaped the lab?
        
               | bayesian_horse wrote:
               | To what standard? It's the same game with climate change.
               | When only 1% of the scientists dissent, that gives
               | certain people enough confidence to believe the opposite
               | of what the 99% believe.
        
               | xupybd wrote:
               | I'm always skeptical when people say x% of scientists
               | agree or disagree with a given hypothesis. Most of the
               | time these numbers are flat out wrong or misleading. Most
               | scientists have very complex views on their own domain.
               | Those complexities lead to a very nuanced understanding
               | of topics that we lay people don't fully understand. Most
               | have subtle disagreements on most topics.
        
               | TechBro8615 wrote:
               | In fact it seems like a reasonable assumption that on
               | many days at a BSL-3+ lab, we're trusting at least one
               | hungover graduate student who is operating on two hours
               | of sleep at 9 in the morning, not to commit human error
               | while implementing biosafety protocols to protect against
               | the accidental release of a synthetic pathogen to the
               | local urban population.
               | 
               | Another comment in this thread suggested building these
               | labs in a desert or some other extreme environment where
               | scientists can be isolated for months at a time. This
               | seems like an obviously necessary mitigation against the
               | unknown risk of introducing synthetic pathogens that
               | haven't been created in billions of years of evolution.
               | And yet, the secretive groups funding and regulating this
               | research instead choose to build their labs in urban
               | centers. Why?
        
               | heavyset_go wrote:
               | Bioweapon labs have a history of being built on small
               | islands for this reason.
               | 
               | > _This seems like an obviously necessary mitigation
               | against the unknown risk of introducing synthetic
               | pathogens that haven 't been created in billions of years
               | of evolution._
               | 
               | I'd wager that it's likely that the COVID variant that
               | was made in a lab was also created through evolution at
               | some point. Every infected person with the virus has
               | billions of viral replications taking place in their
               | body, and each virus itself will have its own mutations.
               | There's a high chance such mutations already took place,
               | somewhere and in someone/something, but those mutants
               | never created their own worldwide outbreaks.
               | 
               | I think it's worthwhile to understand how mutations can
               | affect a virus at the heart of a pandemic. Finding such
               | mutations in the wild is a roll of the dice, and the
               | chances of encountering something like it rise the longer
               | and more widespread the epidemic is.
        
               | inkcapmushroom wrote:
               | An obvious answer is it's expensive to build and hard to
               | staff and maintain labs in extreme environments.
        
               | sampo wrote:
               | > This particular variant that didn't exist until humans
               | combined two variants into a new one?
               | 
               | Nature created a very similar hybrid earlier: "Deltacron"
               | was in the news in March 2022.
               | 
               |  _The gene that encodes the virus's surface protein --
               | known as spike -- comes almost entirely from Omicron. The
               | rest of the genome is Delta._
               | 
               | https://www.nytimes.com/2022/03/11/science/deltacron-
               | coronav...
               | 
               |  _His team described three patients in France infected
               | with a version of SARS-CoV-2 that combines the spike
               | protein from an Omicron variant with the "body" of a
               | Delta variant._
               | 
               | https://www.reuters.com/business/healthcare-
               | pharmaceuticals/...
        
           | foobarian wrote:
           | I read this and dream of the day where the common cold is
           | cured. And it makes it all seem worth it.
        
             | ZoomerCretin wrote:
             | There is no common cold. There are over 200 distinct
             | viruses that cause the illness we call "a cold."
        
               | foobarian wrote:
               | s/common cold/over 200 distinct viruses that cause the
               | illness we call "a cold."/
        
               | echelon wrote:
               | Sure, but investigators need to treat this subject with
               | reverence. Unlike pretty much every other discipline on
               | earth, this one has the potential to disrupt billions of
               | lives from a single mistake.
               | 
               | Virologists were the first ones that jumped to say Covid
               | wasn't a lab leak, yet what they should have been saying
               | was, "we'll get to the bottom of this and then, even if
               | wasn't a lab leak, work to make sure that outcome never
               | comes to pass."
               | 
               | Instead we got a blame game, accusations of racism, and
               | everyone not in their field was called stupid or
               | incapable of understanding the situation if we asked for
               | more light to be shed in the subject.
               | 
               | Also, what happened to the scientific method? There was a
               | whole lot of certainty being prematurely thrown around.
               | 
               | This hubris won't do.
               | 
               | I don't know how Covid came about, and at this point the
               | only reason to know is to prevent the next one. But no
               | matter the case, whatever is next better not be from a
               | lab.
        
               | varelse wrote:
        
               | John23832 wrote:
               | You want a global replace, so the end is "/g"... but I
               | feel you lol.
        
               | spookthesunset wrote:
               | > There are over 200 distinct viruses that cause the
               | illness we call "a cold."
               | 
               | Probably far, far more than that if you count the
               | inevitable mutations that occur during replication.
        
               | echelon wrote:
               | It's a feature of how our language, labeling systems, and
               | brains can only grapple with so many things. We rarely
               | need to be so precise.
               | 
               | There are millions of human cells in your body right now
               | that don't share "your" DNA [1] due to mutation or
               | specialization (somatic recombination, Barr bodies, etc.)
               | 
               | We've known this since trying to apply species
               | categories.
               | 
               | [1] "your" DNA becomes a population average sometime
               | after fertilization.
        
               | MichaelCollins wrote:
               | Discrete classification of continuous phenomena is always
               | going to be messy. Humans create discrete categories
               | because they are useful to humans, but it's always
               | important to remember the map is not the terrain.
        
             | [deleted]
        
             | sterlind wrote:
             | what? nearly nobody's dying from the common cold. covid
             | kills hundreds of people every day. how is fucking around
             | with covid worth a common cold cure?!
        
               | [deleted]
        
               | MichaelCollins wrote:
               | Common colds push many people on the brink of death over
               | the edge. But to your point, the years of potential life
               | lost (YPLL) when that happens is minimal.
        
               | zasdffaa wrote:
               | > Common colds push many people on the brink of death
               | over the edge
               | 
               | Be nice if you could provide some backup cos I've not
               | heard of this, or any idea how bad it is.
        
           | dilap wrote:
           | > or they have something they want to hide.
           | 
           | Indeed. I recommend this interview with Jeffrey Sachs, who
           | headed _Lancet 's_ commision to investigate Covid-19.
           | 
           | https://infoproc.blogspot.com/2022/10/jeffrey-sachs-
           | lessons-...
           | 
           | You may find your eyebrows a couple inches higher after
           | listening :-)
        
             | beebmam wrote:
             | No thanks, I'd rather trust virologists and the people who
             | are doing the actual engineering. I don't trust
             | directors/executives, by definition. They have ZERO idea
             | about nearly anything, other than sounding confident.
        
             | throwaway1248 wrote:
        
       | AnnoyedComment wrote:
        
       | somenameforme wrote:
       | Many people seem to believe that lab leaks are exceptionally
       | rare:
       | https://en.wikipedia.org/wiki/List_of_laboratory_biosecurity...
       | 
       | That page offers "only" dozens of examples in recent times, but
       | that is certainly going to be non-exhaustive and the potential
       | magnitude of impact of a single of these incidents is difficult
       | to overstate. Notably while the biosafety levels for each leak
       | are not stated, at least two came from BSL-4 labs - the highest
       | safety standard there is.
        
         | justinpombrio wrote:
         | Covid has killed something like 20 million people (taken from
         | Wikipedia, estimated based on excess deaths). It's plausible
         | that it came from a lab leak. How _bloody fucking valuable_ do
         | you have to think  "making viruses more deadly and studying
         | them" is for this to be worthwhile?
         | 
         | Oh, actually you can calculate this, assuming you're
         | utilitarian and think risking innocent lives is OK as long as
         | it saves that many lives in expectation. If you think there's a
         | 10% chance that Covid came from a lab leak, then the "making
         | viruses more deadly" research that we've done _so far_ ought to
         | have saved more than 10% * 20 million = 2 million people. Did
         | it? From what I 've heard it's done fuck-all.
         | 
         | I stand by my pissed off voice here. I think it's appropriate
         | to be pissed off about risking _millions of lives_ for
         | hypothetical benefits.
         | 
         | (To be clear, I'm only talking about research that studies
         | deadly extinct viruses and deadly lab-created viruses. We
         | should absolutely continue to study viruses in general.)
        
           | alchemist1e9 wrote:
           | It's taken 2 years for logic to finally overcome political
           | polarization and you can now express a logical opinion
           | without being removed from the internet! Progress.
        
             | president wrote:
             | I don't think it ever went away. You see people getting
             | massively flagged or downvoted and called "Republican" for
             | going against the grain everyday here on HN.
        
           | wwweston wrote:
           | What makes you think it's _easy_ to distinguish  "studying
           | viruses in general" from "making viruses more deadly"?
           | 
           | I'm happy to listen to expert virologists tell me about how
           | they could advance the field without modifying/running viral
           | code. Maybe they're a hell of a lot better at their job than
           | most software types who rely on that. I suspect that's not
           | how it works, though.
           | 
           | And hey, let's do more arbitrary probability space
           | exploration! The Lancet says almost 20 million people have
           | probably been saved by covid vaccinations[0]. If toying with
           | viral DNA|RNA helped produce 10% of the research contributing
           | to that, and/or any additional margin supporting other
           | interventions, then I guess it fits your people-saved
           | profile.
           | 
           | [0] https://www.thelancet.com/journals/laninf/article/PIIS147
           | 3-3...
        
           | timbo1642 wrote:
        
       | kbos87 wrote:
       | I live right around the corner from here and pass this place
       | daily. There was a lot of concern when this place was built in
       | the heart of a major city and I understand the concern (though
       | I'm guessing the risk a place like this poses is really in that
       | an individual who works there gets infected with something and
       | goes out into society - which means the location doesn't matter
       | much.)
       | 
       | On the flipside, I also understand that research like this needs
       | to happen for us to learn and make progress. All that being said,
       | this just comes off as sloppy, which is exactly the feeling I
       | don't want to have about a BSL-3 lab in my neighborhood.
        
       | bayesian_horse wrote:
       | Lab-made viruses like that have a close to zero chance of being
       | more successful in the wild, even if the researchers had
       | attempted that goal.
       | 
       | Evolution can try gazillions of variations. Humans can't. No,
       | computer simulation doesn't help that much. No, drawing
       | conclusions from differences in natural strains also doesn't
       | help.
        
         | achr2 wrote:
         | This isn't a random 'lab made virus' this is a virus made by
         | taking the specifically deadly aspects of one strain and adding
         | the specifically infectious aspects of another. There is a
         | _very_ high likelihood of it being successful, because it
         | already _is_. What is unlikely are these mutations happening
         | naturally, which is why this should never be researched in sub-
         | BSL-4 environments.
        
         | ARandomerDude wrote:
         | Because...?
         | 
         | I'm not saying you're wrong, just that most of us aren't
         | virologists.
        
           | bayesian_horse wrote:
           | I'm neither. But basically designing a Virus would mean
           | composing a 30k long string of RNA (in this case) which
           | creates the proteins and RNA molecules which do all the
           | things a Virus does. And it does more than you'd think. It
           | makes the cell copy the Virus, make the proteins, often
           | interferes with other processes in the cell.
           | 
           | Copying the genome is easy. Making specific modifications
           | isn't even that hard, as long as you don't have the illusion
           | to know the result beforehand. But for the Virus to change
           | its behavior in a meaningful/useful way requires multiple
           | changes. The best someone could do is recombine changed parts
           | from multiple variants. But they don't necessarily fit
           | together. And the recombination also happens in nature,
           | probably a lot more often than in the lab.
        
             | baja_blast wrote:
             | And yet H5N1 virus has yet to spread between mammals, but
             | an airborne version of H5N1 that can spread between
             | ferrets(and by extension humans) was achieved in a lab: htt
             | ps://www.science.org/doi/10.1126/science.1213362?cookieSe..
             | ..
        
               | bayesian_horse wrote:
               | Yes. It has spread. And was very non-virulent. And they
               | got valuable data on what to do when H5N1 does become
               | transmissible in Humans.
               | 
               | However, had this Virus escaped, it would have fizzled.
               | Showing airborne transmission does not mean the Virus
               | would spread among ferrets and Humans under normal
               | conditions. Mammalian H5N1 viruses might have already
               | existed but failed to survive subsequent passage and thus
               | did not evolve to become transmissible enough. Such lab
               | experiments only add a minuscule risk to the much bigger
               | risk of such a Virus occurring naturally.
        
       | lamontcg wrote:
       | This involves testing the Omicron spike on a Wuhan-Hu-1 backbone.
       | 
       | Damn near every single person in this comment thread has
       | antibodies and T-cells to Omicron spike and everyone naturally
       | infected has T-cells for the original strain as well because
       | T-cell epitopes aren't immune escape targets.
       | 
       | Chances of this "escaping" the lab and producing another
       | coronavirus wave are zero because that already happened.
       | 
       | Like Derek Lowe pointed out nature already did a similar
       | experiment with an Omicron spike and a Delta backbone because
       | coronaviruses undergo recombination naturally:
       | 
       | https://www.science.org/content/blog-post/gain-function-not-...
       | 
       | Nobody has heard of the XD strain because there was so much
       | immunity to it that it never really went anywhere.
        
         | Terr_ wrote:
         | > Damn near every single person in this comment thread has
         | antibodies and T-cells to Omicron spike and everyone naturally
         | infected has T-cells for the original strain as well because
         | T-cell epitopes aren't immune escape targets.
         | 
         | Checking my layperson understanding by trying to make a dumbed-
         | down version:
         | 
         | "The outside of the new virus is stuff almost everybody's
         | immune system should already be primed to seek and destroy,
         | preferably before it hits a human cell. Even if it _does_ hit a
         | human cell, the inside stuff is old /simple enough that your
         | immune system should easily recognize that the cell is infected
         | and swollen, and kill it quickly too, there are no false
         | everything-is-fine-here tricks."
        
           | lamontcg wrote:
           | Correct.
           | 
           | See for example:
           | 
           | https://journals.asm.org/doi/10.1128/mbio.03617-21
           | 
           | "These data suggest that virtually all individuals with
           | existing anti-SARS-CoV-2 CD8+ T-cell responses should
           | recognize the Omicron VOC and that SARS-CoV-2 has not evolved
           | extensive T-cell escape mutations at this time."
           | 
           | https://www.nature.com/articles/s41423-022-00838-5
           | 
           | "Although the Omicron variant escapes neutralizing antibodies
           | induced by COVID-19 vaccination or natural infection [1,2,3],
           | our current analysis demonstrates that T cell epitopes are
           | considerably conserved in the Omicron variant and that
           | substantial proportions of memory T cells elicited by
           | COVID-19 vaccination or natural infection respond to the
           | Omicron spike. These results indicate that memory T cells may
           | provide protective immunity during reinfection or
           | breakthrough infection with the Omicron variant."
           | 
           | Here's a review of all the SARS-CoV-2 T-cell epitopes:
           | 
           | https://www.sciencedirect.com/science/article/pii/S193131282.
           | ..
           | 
           | "Here, we focus on a specific topic: our current knowledge
           | concerning the definition and recognition of SARS-
           | CoV-2-derived T cell epitopes in humans. While the data
           | related to this topic was initially sparse, 25 different
           | studies have now been published as of March 15, 2021 [...],
           | which collectively report data from 1,197 human subjects (870
           | COVID-19 and 327 unexposed controls), leading to the
           | identification of over 1,400 different CD4 (n = 382) and CD8
           | (n = 1052) T cell epitopes."
           | 
           | And I'd highly recommend this video on the adaptive immune
           | system, along with the whole rest of the series:
           | 
           | https://www.youtube.com/watch?v=dXL2TvhNqZI&list=PLGhmZX2NKi.
           | ..
           | 
           | (I think that covers how proteins get chopped up by proteases
           | and then those short epitopes are displayed on MHC receptors
           | and undifferentiated T-cells learn to identify them)
        
         | tripletao wrote:
         | > Chances of this "escaping" the lab and producing another
         | coronavirus wave are zero because that already happened.
         | 
         | Are you aware of any situation where the omicron spike and
         | Wuhan backbone could have recombined naturally? As far as I
         | know, the latter was extinct in the wild by the time the former
         | emerged.
         | 
         | It's good that the omicron/delta variant didn't blow up in
         | humans. The omicron/Wuhan variant seems like another throw of
         | the dice, though, and even a very small probability times
         | millions of potential deaths is significant.
        
           | lamontcg wrote:
           | You didn't read carefully what I wrote.
           | 
           | The T-cell epitopes in all strains of SARS-CoV-2 are not
           | subject to immune escape and there are thousands of them.
           | Even the neutralizing antibodies to Wu-Hu-1 spike will cross
           | react with omicron still.
           | 
           | Nobody at this point is immune naive to this combination.
           | 
           | And the most recent pandemic strain of SARS-CoV-2 was
           | Omicron. If this Omicron spike containing virus escaped into
           | the wild then it will encounter a human race with substantial
           | neutralizing antibody activity to this exact spike protein
           | sequence.
           | 
           | And there isn't any "but maybe by splicing them together it
           | literally changes everything, you can't possibly prove that
           | isn't true" argument. This isn't science fiction. Inside the
           | cell all of these proteins are diced up into small hexamers
           | and displayed on MHC and it doesn't matter what the
           | combination of the spike and the backbone are, the T-cell
           | epitopes are going to be the same. Omicron spike will have
           | Omicron antibody epitopes and Omicron T-cell epitopes, doen't
           | matter what backbone you splice it onto. If you want to
           | create a new pandemic, particularly one with "millions of
           | potential deaths" you need to change this virus sufficiently
           | that it is no longer identified as SARS-CoV-2 by our T-cells
           | and you don't get that just by combining two different
           | variants.
        
             | alchemist1e9 wrote:
             | You and Derek Lowe are at best apologists who due to your
             | myopic perspective can't see the obvious risks that many of
             | us outsiders can imagine. At worst you're part of a group
             | for which "it is difficult to get a man to understand
             | something, when his salary depends on his not understanding
             | it"
        
               | lamontcg wrote:
               | If I wind up rotting in hell with Derek Lowe that'll be
               | pretty good company, I think I'll take that.
        
             | tripletao wrote:
             | If that's your argument, then what do you even need the XD
             | strain for? You could simply assert that because natural
             | omicron has spread widely, any lab chimera with the omicron
             | spike must be safe. That seems remarkably cavalier though,
             | considering that (a) natural omicron continues to spread,
             | and kill people every day; and (b) while China's reported
             | case counts are probably inaccurate, they probably do still
             | have a large population that's completely omicron-naive.
        
               | lamontcg wrote:
               | I clearly didn't need the XD strain, I thought that would
               | be read as supplementary.
               | 
               | I routinely forget that no matter how clear your argument
               | sounds to you that someone on the Internet will always
               | misunderstand it (and pick apart a detail that has no
               | central relevance).
        
               | tripletao wrote:
               | Except that natural omicron continues to kill people now?
               | So it's empirically true that at least one backbone
               | (i.e., the natural omicron backbone) plus the omicron
               | spike remains able to cause significant sickness and
               | death, despite the immunity we've built up, even outside
               | China. So what's your argument that the risk from a
               | different backbone is "zero"?
        
       | buscoquadnary wrote:
       | Sweet maybe after this we can go ahead and extract DNA from a
       | mosquito in amber and use that to make dinosaurs and open a theme
       | park with them. Sounds like that is the next Chriton movie on the
       | list now that we are checking of "The Andromeda Strain".
        
         | dqpb wrote:
         | I'm totally in favor of bringing back dinosaurs. I'm also in
         | favor of modifying animals to have more human-like brains.
         | 
         | I understand that many/most people would oppose this on ethical
         | grounds. I could probably even articulate those positions if I
         | tried.
         | 
         | But, deep down in my inner child, I think the world would be
         | much more interesting if these things existed.
        
           | buscoquadnary wrote:
           | I will consent to your argument on the grounds that we
           | provide equal funding and research to the construction of
           | giant robots to fight the dinosaurs when they escape.
        
             | dqpb wrote:
             | Sounds like a win-win!
        
       | AzzieElbab wrote:
       | IMHO the real question is why would we do this? Just because we
       | can? Is there a hidden bio arms race we can't stay away from?
        
         | hotpotamus wrote:
         | Some people get a kick out of 3D printing guns in their garage.
         | Why not apply that to other weapons?
        
           | AzzieElbab wrote:
           | No one is 3d printing ballistic nuclear weapons. Scale
           | matter?
        
             | AnimalMuppet wrote:
             | If you use weapons-grade plutonium as the feed stock for
             | your 3D printer, you won't live long enough for the scale
             | issues to stop you.
        
           | MichaelCollins wrote:
           | Unlike those who print guns, I don't think virologists are
           | motivated by spite for politicians.
        
             | hotpotamus wrote:
             | I don't see any reason there would be correlation in those
             | qualities. But it's more that I think that advances in
             | technology will eventually democratize biological weapons
             | in ways that 3d printing have democratized the production
             | of small arms.
        
             | muaytimbo wrote:
             | Virologists at academic centers like BU are beholden to
             | their paymasters. Grant-writing and groveling day in and
             | day out. I'm not sure what feelings develop in that endless
             | loop of futility.
        
         | stiiv wrote:
         | > The goal of the research was to determine if the mutations in
         | the Omicron spike protein were responsible for this variant's
         | increased ability to evade the immunity to SARS-2 that humans
         | have built up, and whether the changes led to Omicron's lower
         | rate of severity.
        
         | arminiusreturns wrote:
         | Yes, there is an arms race, an all-arms race of which bio is
         | only a part. I reccomend the following two books, _The Sheild
         | of Achilles: War, Peace, and the Course of History_ , and _The
         | Shadow World: Inside the Global Arms Trade_.
         | 
         | The revolution in technology has shifted the global array of
         | national security threat models away from _just_ the nation-
         | state. The low barrier to entry to tech like the latest in bio
         | or cyber research means now a single actor with no grouo or
         | state affiliations is now capable of producing some destructive
         | event on a national or even global scale.
         | 
         | On the backend, this is one of the quiet whispers in the halls
         | of power in DC as a justification for the surveillance systems
         | being enabled. You ask if there is an arms race. No, there are
         | many arms races going on right now.
         | 
         | Just like nuclear, if its possible they will consider building
         | it, potential side effects be damned, as long as we have some
         | force multiplier the "enemy" doesn't.
        
         | shadowgovt wrote:
         | Yes, but it's not hidden.
         | 
         | On the one side of it: humanity, and our ability to explore,
         | comprehend, and modify the reality around us.
         | 
         | On the other side of it: naturally-evolved viruses. They have a
         | couple billion years' practice overriding biological
         | countermeasures and massive territory advantage. If we do
         | nothing, odds are they will eventually mutate into something
         | that drops us dead in our tracks or wrecks us slowly, as they
         | have before (smallpox, 1918 flu, HIV). And in our modern,
         | deeply-interconnected world, geographic defenses and population
         | isolation no longer protect us as they did our ancestors.
         | 
         | The main tools we have to avoid this are our ability to
         | explore, comprehend, and modify. The capacity to change
         | something and observe how the change affects it is something
         | the viruses cannot do, and arguably our best chance of
         | "outsmarting" them so that when they naturally mutate into a
         | dangerous form, we already have the tools in place to mitigate
         | or disassemble the danger.
        
           | throwaway4aday wrote:
           | Exactly how does modifying the virus help create prevention
           | measures or treatments for it? Please provide real world
           | examples.
        
         | photochemsyn wrote:
         | The most banal reason is that groups of researchers generally
         | coordinate to set up little bureaucratic power centers within
         | the national research agencies to ensure themselves a steady
         | stream of grants; this in turn allows them to get tenure at
         | their universities (under 'publish or perish' which more
         | practically means 'get your grant renewed or perish' and grant
         | renewal relies on (1) a steady stream of publications and (2)
         | ensuring the federal agency keeps earmarking funds for your
         | area of research).
         | 
         | This is all perhaps well and good if you're fighting for funds
         | for studying, say, childhood leukemia, but in this case it's
         | been a major disaster and has almost certainly played a central
         | role in this recent global pandemic. Oops.
        
         | MichaelCollins wrote:
         | _87. Science and technology provide the most important examples
         | of surrogate activities. Some scientists claim that they are
         | motivated by "curiosity" or by a desire to "benefit humanity."
         | But it is easy to see that neither of these can be the
         | principal motive of most scientists. As for "curiosity," that
         | notion is simply absurd. Most scientists work on highly
         | specialized problems that are not the object of any normal
         | curiosity. For example, is an astronomer, a mathematician or an
         | entomologist curious about the properties of
         | isopropyltrimethylmethane? Of course not. Only a chemist is
         | curious about such a thing, and he is curious about it only
         | because chemistry is his surrogate activity. Is the chemist
         | curious about the appropriate classification of a new species
         | of beetle? No. That question is of interest only to the
         | entomologist, and he is interested in it only because
         | entomology is his surrogate activity. If the chemist and the
         | entomologist had to exert themselves seriously to obtain the
         | physical necessities, and if that effort exercised their
         | abilities in an interesting way but in some nonscientific
         | pursuit, then they wouldn't give a damn about
         | isopropyltrimethylmethane or the classification of beetles.
         | Suppose that lack of funds for postgraduate education had led
         | the chemist to become an insurance broker instead of a chemist.
         | In that case he would have been very interested in insurance
         | matters but would have cared nothing about
         | isopropyltrimethylmethane. In any case it is not normal to put
         | into the satisfaction of mere curiosity the amount of time and
         | effort that scientists put into their work. The "curiosity"
         | explanation for the scientists' motive just doesn't stand up._
         | 
         |  _88. The "benefit of humanity" explanation doesn't work any
         | better. Some scientific work has no conceivable relation to the
         | welfare of the human racesmost of archaeology or comparative
         | linguistics for example. Some other areas of science present
         | obviously dangerous possibilities. Yet scientists in these
         | areas are just as enthusiastic about their work as those who
         | develop vaccines or study air pollution. Consider the case of
         | Dr. Edward Teller, who had an obvious emotional involvement in
         | promoting nuclear power plants. Did this involvement stem from
         | a desire to benefit humanity? If so, then why didn't Dr. Teller
         | get emotional about other "humanitarian" causes? If he was such
         | a humanitarian then why did he help to develop the H-bomb? As
         | with many other scientific achievements, it is very much open
         | to question whether nuclear power plants actually do benefit
         | humanity. Does the cheap electricity outweigh the accumulating
         | waste and the risk of accidents? Dr. Teller saw only one side
         | of the question. Clearly his emotional involvement with nuclear
         | power arose not from a desire to "benefit humanity" but from a
         | personal fulfillment he got from his work and from seeing it
         | put to practical use._
         | 
         |  _89. The same is true of scientists generally. With possible
         | rare exceptions, their motive is neither curiosity nor a desire
         | to benefit humanity but the need to go through the power
         | process: to have a goal (a scientific problem to solve), to
         | make an effort (research) and to attain the goal (solution of
         | the problem.) Science is a surrogate activity because
         | scientists work mainly for the fulfillment they get out of the
         | work itself._
         | 
         |  _90. Of course, it 's not that simple. Other motives do play a
         | role for many scientists. Money and status for example. Some
         | scientists may be persons of the type who have an insatiable
         | drive for status (see paragraph 79) and this may provide much
         | of the motivation for their work. No doubt the majority of
         | scientists, like the majority of the general population, are
         | more or less susceptible to advertising and marketing
         | techniques and need money to satisfy their craving for goods
         | and services. Thus science is not a PURE surrogate activity.
         | But it is in large part a surrogate activity._
         | 
         |  _91. Also, science and technology constitute a power mass
         | movement, and many scientists gratify their need for power
         | through identification with this mass movement (see paragraph
         | 83)._
         | 
         |  _92. Thus science marches on blindly, without regard to the
         | real welfare of the human race or to any other standard,
         | obedient only to the psychological needs of the scientists and
         | of the government officials and corporation executives who
         | provide the funds for research._
        
           | sterlind wrote:
           | I read Industrial Society to my parents, and we were all
           | shocked how cogent it came across as. the bits about AI were
           | especially chilling, very ahead of his time. I disagree with
           | his conclusions about leftists (I am one), but I have to hand
           | it to him for an excellent take.
        
           | photochemsyn wrote:
           | This viewpoint is pretty modern (mid-20th century onwards) -
           | historically, many 'pure science' pursuits were the hobbies
           | or obsessions of the relatively wealthy aristrocrat classes,
           | and they really were motivated by curiousity (as their basic
           | physical needs were already well-provided for), with the
           | exception of rather small groups that found funding in other
           | ways (Royal Society of Britain), who even then tended to rely
           | heavily on things like royal patronage (see Euler, Kepler,
           | etc. for example).
           | 
           | Even now, in the era of federal grants provinding the meat &
           | potatoes, a lot of scientists have multiple motivations, as
           | in 'this line of research really is quite useful to
           | industrial progress/understanding nature/fighting disease/etc
           | and thus human civilization' as well as 'hey, I can make a
           | decent living and get a fair amount of social prestige by
           | doing this'.
           | 
           | The internal bureaucratic politics of the modern science
           | world are pretty nasty though, it's like bad office politics
           | on steroids. Possibly the most extreme example of how it call
           | all go wrong is seen in the legacy of Trofim Lysenko in the
           | Soviet Union. Comparing Anthony Fauci to Lysenko might seem a
           | bit extreme but recent events show how these types can
           | utilize their power to protect their position, even if the
           | kind of 'science' they're promoting is either reckless and
           | dishonest or just manufactured ideological nonsense.
        
             | MichaelCollins wrote:
             | If you follow Ted's arguments, the hobbies of wealthy
             | aristocrat classes are perhaps the purest example of
             | surrogate activities. He explains the concept of surrogate
             | activities using leisured aristocrats as his prime example:
             | 
             |  _38. But not every leisured aristocrat becomes bored and
             | demoralized. For example, the emperor Hirohito, instead of
             | sinking into decadent hedonism, devoted himself to marine
             | biology, a field in which he became distinguished. When
             | people do not have to exert themselves to satisfy their
             | physical needs they often set up artificial goals for
             | themselves. In many cases they then pursue these goals with
             | the same energy and emotional involvement that they
             | otherwise would have put into the search for physical
             | necessities. Thus the aristocrats of the Roman Empire had
             | their literary pretensions; many European aristocrats a few
             | centuries ago invested tremendous time and energy in
             | hunting, though they certainly didn 't need the meat; other
             | aristocracies have competed for status through elaborate
             | displays of wealth; and a few aristocrats, like Hirohito,
             | have turned to science._
             | 
             |  _39. We use the term "surrogate activity" to designate an
             | activity that is directed toward an artificial goal that
             | people set up for themselves merely in order to have some
             | goal to work toward, or let us say, merely for the sake of
             | the "fulfillment" that they get from pursuing the goal.
             | Here is a rule of thumb for the identification of surrogate
             | activities. Given a person who devotes much time and energy
             | to the pursuit of goal X, ask yourself this: If he had to
             | devote most of his time and energy to satisfying his
             | biological needs, and if that effort required him to use
             | his physical and mental faculties in a varied and
             | interesting way, would he feel seriously deprived because
             | he did not attain goal X? If the answer is no, then the
             | person's pursuit of goal X is a surrogate activity.
             | Hirohito's studies in marine biology clearly constituted a
             | surrogate activity, since it is pretty certain that if
             | Hirohito had had to spend his time working at interesting
             | non-scientific tasks in order to obtain the necessities of
             | life, he would not have felt deprived because he didn't
             | know all about the anatomy and life-cycles of marine
             | animals. On the other hand the pursuit of sex and love (for
             | example) is not a surrogate activity, because most people,
             | even if their existence were otherwise satisfactory, would
             | feel deprived if they passed their lives without ever
             | having a relationship with a member of the opposite sex.
             | (But pursuit of an excessive amount of sex, more than one
             | really needs, can be a surrogate activity.)_
        
               | photochemsyn wrote:
               | This viewpoint seems to imply that anything not directly
               | related to biological survival and procreation is a
               | 'surrogate activity' which then includes all of art,
               | science, literature, etc. Would this author also classify
               | some of the earliest human technologies (controlling
               | fire, making tools, propagating plants from seeds) as
               | 'surrogate activities' as well?
               | 
               | It seems like a logical quandry. If the only measure of
               | non-surrogate activity is something like 'does this
               | activity contribute to the survival of the individual,
               | the family, the society, the species', and if science is
               | a surrogate activity, then why isn't learning how to
               | control fire also an unnecessary and frivolous activity?
        
               | MichaelCollins wrote:
               | > _This viewpoint seems to imply that anything not
               | directly related to biological survival and procreation
               | is a 'surrogate activity' which then includes all of art,
               | science, literature, etc._
               | 
               | Pretty much yeah. I don't think he's implying it as much
               | as saying that outright. He doesn't condemn all surrogate
               | activities equally though. He has ire specifically for
               | those surrogate activities he believes inevitably
               | restrict the freedom of individuals to go through their
               | own power process, specifically science and
               | industrialization. I'll not dump more large quotations in
               | this thread, but read the section _" Restriction of
               | Freedom is Unavoidable in Industrial Society"_ if you
               | want to hear his reasoning for this.
               | 
               | I am not an anarcho-primitivist so the above is not the
               | point _I_ am trying to make. I provided the quotations in
               | my previous comments to answer the question _" why would
               | we do this? Just because we can?"_ I believe the answer
               | is this: _" scientists work mainly for the fulfillment
               | they get out of the work itself."_
        
           | thrown_22 wrote:
           | > But it is easy to see that neither of these can be the
           | principal motive of most scientists. As for "curiosity," that
           | notion is simply absurd. Most scientists work on highly
           | specialized problems that are not the object of any normal
           | curiosity. For example, is an astronomer, a mathematician or
           | an entomologist curious about the properties of
           | isopropyltrimethylmethane? Of course not. Only a chemist is
           | curious about such a thing, and he is curious about it only
           | because chemistry is his surrogate activity. Is the chemist
           | curious about the appropriate classification of a new species
           | of beetle? No. That question is of interest only to the
           | entomologist, and he is interested in it only because
           | entomology is his surrogate activity. If the chemist and the
           | entomologist had to exert themselves seriously to obtain the
           | physical necessities, and if that effort exercised their
           | abilities in an interesting way but in some nonscientific
           | pursuit, then they wouldn't give a damn about
           | isopropyltrimethylmethane or the classification of beetles.
           | 
           | What rubbish. One need only look at Euclid's Elements to see
           | that a small portion of humanity has always been interested
           | in completely irrelevant but highly specialized formal
           | knowledge manipulation. That a single book about math has
           | survived for longer than the Bible and been translated to a
           | few dozen languages, across a dozen civilizations tells you
           | all you need to know about the universality of curiosity.
           | 
           | Yes, if you're starving you won't be spending your time on
           | curiosity, but you also won't be doing much of anything but
           | looking for food. You might as well say that sex is a
           | surrogate activity that we'd give up if we found something
           | better to do.
        
       | null_object wrote:
       | > There is a lot of evidence that points to the virus spreading
       | from a wet market in the city, not the Wuhan lab. But proving
       | something didn't happen three years after the fact is a challenge
       | that may be impossible to meet.
       | 
       | I find the anxious disclaimer about the Wuhan lab interesting,
       | because of course there were a lot of things the lab itself could
       | have done to clear any doubt at the time, including not muzzling
       | researchers who worked there, and even releasing their virus
       | database (which had been taken offline a couple months earlier,
       | under the pretext that 'someone' had attempted to 'hack' it _and
       | has still not been made available three years later_ ).
        
         | tlear wrote:
        
           | jimcavel888 wrote:
        
         | soco wrote:
         | Important underline: the lab database is not available _to us_.
        
           | null_object wrote:
           | > Important underline: the lab database is not available to
           | us
           | 
           | Genuine question, as I'm not aware that it's been made
           | externally available to anyone - do you mean it's available
           | to _researchers around the world_ but not the general public?
           | Or do you mean it 's available to Chinese labs?
        
             | mikeyouse wrote:
             | It's a dumb conspiracy theory about a rarely-used database
             | that "went down" in September 2019 which was a smoking gun
             | about how the Chinese knew about Covid. Except it turns out
             | that it only came online in June 2019, it went down all the
             | time from the view of the tracking website, was available
             | into 2020, and has absolutely nothing useful to say about
             | SarsCov2;
             | 
             | https://twitter.com/flodebarre/status/1577401140345507859
             | 
             | I'm certain that everyone who used this as a prominent
             | 'datapoint' for the LL hypothesis will immediately
             | reconsider and update their priors.
        
               | pc86 wrote:
               | I think the GP's point is that it's a dumb conspiracy
               | theory data-point that would be incredibly easy to
               | eliminate, and it's frustrating that it's not.
        
               | tripletao wrote:
               | The thread you've linked is deliberately misleading,
               | refuting a strawman version of the "conspiracy theory".
               | Everyone has always agreed that the server was
               | intermittently available until Feb 2020. It's a
               | particular database that went unavailable in Sep 2019,
               | not the whole server. Quoting from a document written by
               | the "conspiracy theorists" more than a year before that
               | thread:
               | 
               | > Batvirus.whiov.ac.cn had been online for a few years,
               | saw a version 2 released in June 2019, went inactive for
               | a week during the second half of August 19, before
               | becoming definitely inaccessible (out of the WIV at
               | least) on the 12th Sep 19. It was online intermittently
               | after this date from mid-December 2019, and occasionally
               | until February 2020, but was not accessed from outside of
               | the WIV after 12 September 2019.
               | 
               | https://www.researchgate.net/publication/349073738_An_inv
               | est...
               | 
               | Were you aware of that? If not, then you might update
               | your priors yourself.
               | 
               | The disappearance of that database obviously isn't proof
               | that the WIV did anything nefarious. It continues their
               | pattern of zero transparency, though. That might just be
               | the reflexive secrecy of an authoritarian state; but the
               | nature of zero transparency is that we don't know.
        
               | Izkata wrote:
               | Their own evidence shows the September 2019 date is
               | correct, and that it wasn't just flakiness like
               | previously, it stayed down for months.
        
         | eli wrote:
         | That's probably true, but so is what's written in the article.
         | A much bigger factor in the lab leak theory is that it played
         | into various conspiracy theories and, for some people, was
         | convenient politically. It's much easier to believe that
         | someone you don't like created covid maliciously than that it
         | evolved naturally thanks to a huge number of factors no one
         | person can control.
        
           | buscoquadnary wrote:
           | In the voice of superintendent Chalmers: A rare novel bat
           | Coronavirus
           | 
           | Emerged in Wuhan.
           | 
           | Down the street from a virology institute
           | 
           | That was studying coronaviruses
           | 
           | That was studying novel bat Coronaviruses
           | 
           | That had multiple breaches of safety protocol in the years
           | leading up to it
           | 
           | Is not where the virus originated?
           | 
           | Skinner: Um yes
           | 
           | "Can we inspect the site freely?"
           | 
           | "No"
           | 
           | "CCP a global pandemic is destroying the world."
           | 
           | "That's just misinformation mother"
        
             | afiori wrote:
             | Also animal-to-human viruses usually go over two phases:
             | first animal to human contagion is possible but human to
             | human is hard, then human to human gets easier as the virus
             | evolves.
             | 
             | If Covid-19 started in the wet market it went over the
             | first phase very quickly.
             | 
             | Part of fighting disinformation and conspiracy theories is
             | also learning to distinguish when things are just lies (eg.
             | sandy hook was an hoax) or truish but misused (eg. chemical
             | waste in river does affect the sex of frogs).
             | 
             | It is also important not o make a strawman of the opponent.
             | For some people the "Lab Theory" is "The CCP was trying to
             | exterminate the US but failed" for others it is "A
             | researcher got bit by a bat in a lab". The former is
             | paranoid, the latter is completely plausible.
             | 
             | Overall there is good circumstantial evidence for both, and
             | reasonable people can disagree.
        
             | jacobolus wrote:
             | Except substitute "down the street" with "30 km away on the
             | other side of a river", and notice that everybody who got
             | sick initially was next to the market, none of them
             | anywhere near the lab.
             | 
             | So the lab-leak hypothesis is: this virus created at the
             | lab accidentally escaped to someone who subsequently only
             | infected people on the other side of town.
             | 
             | It's certainly a possibility (viral transmission is
             | irregular with high variance, and people can easily travel
             | that distance), and the lack of transparency by the
             | government is alarming (though not particularly surprising
             | to folks studying China), but most of the experts who have
             | studied it still think it's relatively unlikely.
        
               | cloutchaser wrote:
        
               | luckylion wrote:
               | Your understanding is that a large conspiracy of various
               | Western and Chinese (and others?) federal institutes have
               | conspired to uphold a fake story because the Western
               | officials funding the Chinese research don't want the
               | world to know that their money was somehow involved?
        
               | cloutchaser wrote:
               | It doesn't take too many data points to at least make you
               | suspicious. It's not a conspiracy theory.
               | 
               | We know Peter Daszak lied about his involvement in this
               | research. We know Fauci made decisions about coronavirus
               | research. We know the NIH funded coronavirus research in
               | wuhan. The chinese took their virus database offline.
               | They refused any serious investigation. The batwoman has
               | disappeared. All these organisations have a lot to lose
               | if it was partly their fault for this pandemic. Yet at
               | they same time they hold the keys to any serious
               | investigation.
               | 
               | This does NOT mean that this is proof that it was a lab
               | leak. But it is extremely suspicious behaviour and
               | circumstances. At a minimum it should warrant serious
               | pressure to investigate what happened.
        
               | null_object wrote:
               | > Except substitute "down the street" with "30 km away on
               | the other side of a river", and notice that everybody who
               | got sick initially was next to the market, none of them
               | anywhere near the lab. > So the lab-leak hypothesis is:
               | this virus created at the lab accidentally escaped to
               | someone who subsequently only infected people on the
               | other side of town.
               | 
               | But this isn't necessarily how it works, at all.
               | 
               | The Wuhan market is one of Wuhan's most population-dense
               | areas, in close proximity to three hospitals where the
               | first cases were identified, and was therefore the
               | concentration for infection-tracing.
               | 
               | In other words, the dataset for early cases was based on
               | a belief that the market was where the infection was
               | spreading, rather than the location of a spreading event
               | that came from elsewhere in the city. Even pneumonia
               | cases that were reported were only post-hoc assigned as
               | probably covid _if they were in close proximity to the
               | market_.
        
               | jacobolus wrote:
               | Again, it's not impossible or even implausible that the
               | spread could have happened like that, or that there were
               | cases elsewhere that went unrecognized. But that's not
               | nearly the same as flippantly describing this as the lab
               | just "down the street" from the market.
               | 
               | The possibility hasn't been incontrovertibly ruled out
               | (and maybe never can be at this point), and it's
               | important to do independent investigations and examine
               | the lab's research, etc. It's just not considered by most
               | experts to be the most likely possibility.
               | 
               | As a geographical comparison, it would be like having a
               | new disease outbreak where all of the known cases for the
               | first several weeks were in Brooklyn, NY and concluding
               | that the source could have been a lab in Newark, NJ. It's
               | possible, but not the first place to look.
        
             | waffleiron wrote:
             | But you can do this too for the Chinese version of the
             | conspiracy too.
             | 
             | ----
             | 
             | Emerged after military games in Wuhan.
             | 
             | Where the US competed.
             | 
             | Who is a geopolitical rival of China.
             | 
             | With soldiers that work at a military biolab.
             | 
             | That had a major biosafety breach the same year.
             | 
             | And the US doesn't let the site be inspected freely.
             | 
             | ----
             | 
             | Each of these are true on their own, that doesn't mean we
             | can conclude the implied conclusion is true.
        
               | baja_blast wrote:
               | But the military games happened in October, the
               | previously public database of the WIV was taken down in
               | September a month prior due to "hacking" which why would
               | someone hack a publicly available database is hard to
               | imagine. And why has the database not been shared via
               | database dumps or uploaded somewhere else since? Also if
               | the outbreak occurred in the US there would have been
               | major spikes in hospitalizations months earlier in the US
               | than what happened in Wuhan.
        
           | colpabar wrote:
           | It's frustrating that people make the argument that the lab
           | leak theory is "politically convenient" and that it "played
           | into various conspiracy theories" and then go on to list
           | ridiculous things that no one here is arguing. A lot of
           | people look at covid, which was first seen in wuhan, and
           | think "hmm, it seems like there's a good chance it came from
           | the lab in wuhan that studies coronaviruses." You don't have
           | to involve politics at all for it to be easy to believe.
        
             | bayesian_horse wrote:
             | You have to ignore all the evidence and data that makes
             | this extremely unlikely.
             | 
             | Just as someone might want to believe the moon is made from
             | cheese. It looks a bit like it, after all. But to believe
             | that, you have to ignore all that scientists have uncovered
             | about the moon.
        
               | noptd wrote:
               | >all the evidence and data that makes this extremely
               | unlikely.
               | 
               | Please, do share.
        
               | themoonisachees wrote:
        
               | xyzzy123 wrote:
               | What data makes this extremely unlikely? Worobey and
               | Pekar are hardly convincing.
        
               | bayesian_horse wrote:
               | Just google it. There's enough out there, but you don't
               | want to believe the experts even though you don't know
               | the science. There is no signature of manipulation in the
               | Genome. Zero sign of it being "recombined". Experts just
               | don't see a clear way it could have happened. Just the
               | inability to say it's impossible and will never happen is
               | seen as confirmation of the hypothesis.
               | 
               | Proponents of the lab-leak hypothesis often believe the
               | researchers have somehow enhanced the virus. The only way
               | we actually know to do this is through evolution in lab
               | animals. And even then it's pretty damn hard. Maybe
               | multiple industrial-scale facilities could evolve a
               | threatening Virus. At horrendous cost. Maybe. And even
               | China couldn't hide that.
        
               | tripletao wrote:
               | The most likely research-origin scenario is either a
               | naturally-evolved novel virus collected and accidentally
               | released by the WIV, or a chimera of multiple such
               | viruses. No genomic evidence could distinguish that from
               | natural spillover. For example, here's David Relman back
               | in 2020:
               | 
               | > This argument [that SARS-CoV-2 must be natural since it
               | doesn't use a known backbone] fails to acknowledge the
               | possibility that two or more as yet undisclosed ancestors
               | (i.e., more proximal ancestors than RaTG13 and RmYN02)
               | had already been discovered and were being studied in a
               | laboratory--for example, one with the SARS-CoV-2 backbone
               | and spike protein receptor-binding domain, and the other
               | with the SARS-CoV-2 polybasic furin cleavage site. It
               | would have been a logical next step to wonder about the
               | properties of a recombinant virus and then create it in
               | the laboratory.
               | 
               | https://www.pnas.org/doi/10.1073/pnas.2021133117
               | 
               | The WIV had the world's largest effort to collect novel
               | sarbecoviruses from nature, often from remote caves that
               | no other humans would routinely visit; so I don't see any
               | reason to discount that possibility.
        
             | somewhereoutth wrote:
             | Unfortunately the politics makes it _comforting_ to believe
             | (even though all the evidence points to natural origin -
             | explained at length here and elsewhere).
             | 
             | It is so much easier to believe that the bad thing was made
             | by bad people somewhere else, instead of confronting the
             | reality that in fact _we_ did it with our ever greater
             | encroachment on the last remaining natural reservoirs - and
             | will do it again, probably soon.
        
             | hotpotamus wrote:
             | Why did the lab in Wuhan study coronaviruses? Is it that
             | there are convenient natural reservoirs nearby?
        
               | Jtype wrote:
               | nope. hundreds of miles away actually.
        
               | tripletao wrote:
               | It is not. In the words of Dr. Shi herself:
               | 
               | > We have done bat virus surveillance in Hubei Province
               | for many years, but have not found that bats in Wuhan or
               | even the wider Hubei Province carry any coronaviruses
               | that are closely related to SARS-CoV-2. I don't think the
               | spillover from bats to humans occurred in Wuhan or in
               | Hubei Province.
               | 
               | https://web.archive.org/web/20210727042832/https://www.sc
               | ien...
               | 
               | Coronaviruses are basically everywhere, as are bats. The
               | greatest abundance of sarbecoviruses is far from Wuhan,
               | though. The closest relatives to SARS-CoV-2 were found in
               | Yunnan and surroundings, near Kunming or Pu'er, and now
               | in Laos.
        
               | hotpotamus wrote:
               | I'm not really familiar with Dr Shi or your source (seems
               | a bit obfuscated via archive.org), but it does seem like
               | a very sober and careful analysis from an expert.
               | 
               | Also, she says what I always assumed was the case:
               | 
               | > Scientists from around the world have overwhelmingly
               | concluded that SARS-CoV-2 originated naturally rather
               | than from any institution.
        
               | tripletao wrote:
               | An expert indeed; Dr. Shi discovered the bat virus
               | ancestors of SARS-1. Her subsequent research at the WIV
               | is the matter of controversy here, as to whether that
               | could have caused the SARS-CoV-2 pandemic. The interview
               | is with Science, the well-known academic journal. That
               | journal seems to have reorganized their website recently
               | and broken my old link, so I used archive.org instead of
               | hunting down the new URL.
               | 
               | So Dr. Shi is obviously going to say the pandemic is of
               | natural origin. Even if she personally believes
               | otherwise, she's under the physical control of the PRC
               | government, and would suffer grave consequences if she
               | went against their official story. My point is that not
               | even she thinks spillover in Wuhan is likely, though. The
               | idea that the WIV was situated in Wuhan because of an
               | abundance of nearby sarbecoviruses is bizarrely common,
               | but it's neither anti-lab-origin nor pro-lab-origin, just
               | wrong.
        
               | hotpotamus wrote:
               | Indeed, I really don't know why there is a virology lab
               | in Wuhan, or why they would be located in any given part
               | of the world.
               | 
               | I tend to assume that covid-19 came about like
               | (presumably) every other virus since time eternal;
               | through random mutation in the wild. What I don't really
               | understand is any sort of singular alternative theory of
               | how it arose - it seems that every alternative is anomaly
               | hunting or god of the gaps type arguments in search of
               | some greater meaning behind it.
        
               | tripletao wrote:
               | I agree there's no conclusive evidence for any specific
               | origin of SARS-CoV-2, unnatural, natural, or otherwise. I
               | don't see the "god of the gaps" analogy, though. There's
               | no evidence that god exists, and attributing actions to
               | god has no predictive or practical benefit. But there's
               | certainly evidence that virologists exist, and were
               | collecting and manipulating novel SARS-like viruses near
               | the origin of a novel SARS-like pandemic. (Are you
               | familiar with the DEFUSE grant proposal?)
               | 
               | So with millions dead, shouldn't we investigate? There
               | are many paths unexplored within reach of American or
               | European subpoena, both in the WIV's collaborators and in
               | sequencer reads from unrelated work that may contain
               | early viral genomes as contamination.
        
               | hotpotamus wrote:
               | What would you like to investigate? This is what I don't
               | understand - what is the alternative to a natural origin?
        
               | tripletao wrote:
               | That researchers at the WIV collected two novel viruses
               | from nature, built a chimera with a synthetic FCS,
               | infected themselves by accident, and spread the virus
               | into the world? The first two steps are exactly what they
               | proposed in DEFUSE; that proposal got rejected, but it's
               | still an indication of the work they might have continued
               | with other funders.
               | 
               | Or that they collected one naturally-evolved virus, got
               | infected in the field, and spread it from there? The WIV
               | sent grad students into remote caves that no other humans
               | routinely entered, specifically selected for their
               | abundance of novel potential pandemic pathogens, with
               | nothing more than nitrile gloves and a surgical mask. So
               | while there are far more farmers and guano collectors
               | (and others creating risk of natural spillover) than WIV
               | grad students, the risk per WIV grad student seems orders
               | of magnitude higher.
        
               | hotpotamus wrote:
               | I'm not really familiar with the acronyms, but I wonder
               | if it would be possible to prove that the virus is _not_
               | artificially constructed? The other theory just sounds
               | like natural origin with an extra step.
               | 
               | But what I wonder most would be, say that it was proven
               | that covid-19 was artificially constructed through some
               | method or other - what would it matter? I wonder if more
               | people would get vaccines? Would China now know that they
               | can unleash something like this on the world with
               | relative impunity? Would it incentivize further research
               | into biological weapons?
        
           | null_object wrote:
           | > It's much easier to believe that someone you don't like
           | created covid maliciously than that it evolved naturally
           | 
           | Ah! and there you did _that thing_ to make an accidental lab-
           | leak a crazy nut job conspiracy theory.
        
         | bayesian_horse wrote:
         | The problem with the lab hypothesis is not that it is extremely
         | unlikely or "forbidden".
         | 
         | The problem is that any suggestion that remotely sounds like it
         | is possible attracts and inflames a large community of nutjobs.
         | Just like it is hard to discuss problems around the Israeli
         | government's actions without attracting anti-semites.
        
           | wara23arish wrote:
           | The damage done from the unchecked israeli government is
           | objectively way worse than being called an anti-semite
           | unfoundedly. Some western journalists like Robert Fisk lives
           | by those values.
           | 
           | I understand that it's complicated to the uninvolved, but
           | coming from the receiving side of israeli missiles, Ill wear
           | the anti-semite badge proudly if it comes to it.
           | 
           | People who have no real skin in the game will understandably
           | avoid being called anti-semite even if it's against their
           | moral compass. I imagine i'd be one of them too if I were
           | born in a different location.
           | 
           | So in regards to the virus, I just wish people would stop
           | caring about fear of association with nutjobs. I believe this
           | causes a type of self-censorship worse than any other tech
           | platform can do.
        
             | bayesian_horse wrote:
             | You don't understand my point. It's not about equating
             | criticism of Israel with anti-semitism. The point is, once
             | you do criticize Israel, you'll attract actual nut jobs who
             | actually hate Jews. And criticizing Israel without
             | acknowledging the other side's culpability can quickly
             | cross over into actual anti-semitism.
        
           | defen wrote:
           | That suggests an easy strategy for anyone who wants to shut
           | down lab-leak discussion: just post maximally-unhinged
           | support for it. See also "cognitive infiltration".
        
             | [deleted]
        
             | [deleted]
        
             | bayesian_horse wrote:
             | You need a critical mass of nutters to achieve any
             | traction. I don't know of any case where someone
             | successfully did that in reality.
        
       | neilv wrote:
       | Around a decade ago, when Boston University was trying
       | (successfully) to have its campus be the site of a BSL-4 lab,
       | there were protests (articles, even outdoor demonstrations) --
       | over the risks of a lab leak of the world's nastiest pathogens,
       | in an dense urban area.
       | 
       | In that dialogue, the public heard a lot about histories of
       | safety incidents at other BSL-4 labs, which generally seemed due
       | to negligence.
       | 
       | Today, given all the presumed awareness of lab leak risks, from
       | the BU BSL-4 protests, and from the subsequent Covid pandemic-- I
       | don't know why anyone at BU would risk modifying Covid without
       | the utmost precautions, including at least using BSL-4 rather
       | than BSL-3.
        
         | giantg2 wrote:
         | It seems stupid to have these sites in urban areas. If we want
         | to do this sort of stuff, build the facility in the desert,
         | with little population, little wildlife population, and
         | environmental factors inhospitable to long lifetime if there is
         | escape.
         | 
         | But I guess safety measures like that are too inconvenient.
        
           | jbandela1 wrote:
           | When I was in medical school, I heard mentioned that
           | Galveston, TX was chosen for a BSL4 laboratory in part
           | because it was an island, and if something bad happened the
           | US could blow up the bridges and quarantine the island.
        
             | ccrush wrote:
             | The same reason was used to host the bioresearch lab at
             | Plum Island, NY. However, they dont have a BSL-4 lab there
             | and testing animals on the island outside the labs revealed
             | that the animals had become infected with various zoonotic
             | pathogens under research at the facility. Citing its
             | proximity to NYC, the decision to shut down the laboratory
             | was made, and a new lab was built in Manhattan. Thankfully,
             | they meant Manhattan, KS, and despite repeated testing, no
             | intelligent life worth protecting was found anywhere in
             | Kansas.
        
             | stonemetal12 wrote:
             | No worries about Hurricane induced lab leak?
        
           | kosievdmerwe wrote:
           | Yeah frankly I can't think of a more dangerous thing humanity
           | could be doing than biological research on infectious
           | diseases in population centers.
           | 
           | Even doing chemical processing in cities is safer since
           | you're only risking the immediate area.
        
           | barbazoo wrote:
           | Might be difficult to get people to work there.
        
             | buscoquadnary wrote:
             | It's really not and is quite common. You keep the site out
             | a ways have workers show up and then bus them out to the
             | site. You only have to keep the site where you are doing
             | the work way out there and so people can do their regular
             | non lab related work closer to home.
             | 
             | It's a really common practice. I live near a national
             | nuclear research lab and they do that. I also grew up near
             | an ICBM building and designing facility and when they
             | needed to run tests they drive several hours out to the
             | west desert to do things just to be safe.
             | 
             | It's not that uncommon or inconvenient, and makes a hell of
             | a lot more sense then just slapping it in the middle of a
             | major metro area.
             | 
             | Seriously we've got tons of land out west that is about a
             | million miles from everything let's use some of that.
        
               | giantg2 wrote:
               | One difference is the bussing may need to be combined
               | with a quarantine period which wouldn't be necessary with
               | nuclear or chemical research.
        
               | buscoquadnary wrote:
               | Would it though? I mean, I am assuming there aren't
               | quarantine procedures right now. You'd just have to make
               | sure you have appropriate disinfectant/decontamination
               | guidelines.
               | 
               | Heck just require decontamination as you leave the lab
               | and as you get off the bus, two times makes it more safe,
               | and I'd imagine a 40 minute bus ride through the
               | sweltering west desert heat in direct isn't an
               | environment that microorganisms my flourish in.
               | 
               | Plus that's easy to do to if there is a quarantine
               | period, out people on shifts of 5-7 days on site, one
               | week off. That's what they do for the oil rigs, plenty of
               | people live like that, it isn't easy, or cheap for the
               | company but a global pandemic that locked down countries
               | shattered supply chains and wreaked havoc with the global
               | economy was a hell of a lot more expensive.
        
               | giantg2 wrote:
               | "Plus that's easy to do to if there is a quarantine
               | period, out people on shifts of 5-7 days on site, one
               | week off."
               | 
               | Exactly.
               | 
               | "have appropriate disinfectant/decontamination
               | guidelines."
               | 
               | Yeah... it seems there have been some issues with people
               | consistently following them. At least with the quarantine
               | you have some defense in depth in case the procedures in
               | the lab failed. (I think a woman in Fance died doing
               | prion research. Why? Because she violated multiple
               | protocols. I want to say she didn't even report it at
               | first, but I could be wrong. And this isnt even a true
               | infectious disease)
        
             | giantg2 wrote:
             | Somehow they make this sort of model work for various
             | classified work in places like NM (although population
             | centers have grown around them due to their size and
             | support requirements). I don't see why something similar
             | can't be done for this. Plenty of Government land in those
             | desert areas out west too.
        
             | godelski wrote:
             | A significant number of military bases operate like this.
             | Edwards and China Lake are great examples. Los Alamos. Even
             | Fermi. Cities developed around these areas over time, but
             | they once were only military/gov projects.
        
             | MichaelCollins wrote:
             | Endangering billions of people because virologists prefer
             | to be urbanite yuppies. Research so important that such a
             | risk is accepted, but not so important that it would make
             | sense to simply pay virologists 5x more to live somewhere
             | remote.
             | 
             | This is _madness._
        
               | rhacker wrote:
               | I don't like the idea of paying virologists more money,
               | they shouldn't even exist.
        
               | MichaelCollins wrote:
               | _Dune_ has been on my mind recently. In the universe of
               | Dune, AI research brings humanity to the brink of ruin.
               | After the rebellion against this, a commandment against
               | creating AIs is added to the major religions. Those found
               | guilty of creating or possessing thinking machines should
               | be sentenced to immediate death. The demonstrable peril
               | of such research is severe enough to justify that
               | punishment.
               | 
               | If virologists create and lose control of something that
               | kills billions of people, wouldn't that justify an
               | ultimate taboo against that kind of research? Maybe
               | that's why virologists all clam up and circle the wagons
               | when something sketchy happens. They say nobody but other
               | virologists are qualified to question virology, but how
               | can they be trusted to regulate themselves?
        
               | giantg2 wrote:
               | The funny thing is, there are some virologists/scientists
               | questioning if the lab was involved (just a minority
               | though).
        
               | lukeschlather wrote:
               | On the other hand, it's easy to imagine that this sort of
               | research is the only path to permanently curing
               | Coronaviruses (and not just Coronaviruses but also
               | Influenza.) As bad as this pandemic was if it was a
               | required step on the road to permanently curing both
               | Coronaviruses and Influenza... that's a no-brainer, it's
               | well worth the pain, it will save billions of lives.
               | 
               | Also if delaying this research delays such a hypothetical
               | Influenza cure by 30 years, that will cost more lives
               | than this pandemic did too.
        
               | notahacker wrote:
               | I'm reasonably confident that there's a more obvious
               | explanation for virologists tending to back other
               | virologists over homeopaths, politicians and contrarians
               | frantically Googling basic virology knowledge in debates
               | about viral transmission and protein structures than fear
               | of Dune-inspired death sentences for every practitioner
               | of their profession.
               | 
               | Sure, and programmers all circle the wagons every time
               | someone suggests that if the company recruits twice as
               | many people to the team it'll get the project done _at
               | least_ twice as quickly. Maybe it 's because they're
               | scared of the employment implications of senior
               | management knowing best :D
               | 
               | Back in reality, half the evidence presented in favour of
               | the 'lab leak' hypothesis is in fact the long list of
               | actual lab leaks virologists have identified and blamed
               | virologists for...
        
             | JPLeRouzic wrote:
             | Can't a lot of things automated and operated at distance?
             | 
             | After all we can do lab experiences on Mars, why not at 200
             | miles (300km) ?
        
             | hallway_monitor wrote:
             | So pay them a little more - enough that you can ask them to
             | live there for 6 months at a time to reduce risk of
             | pathogen escape as much as possible. If this type of
             | dangerous research is actually valuable enough to keep
             | doing, then it is valuable enough to implement protocols
             | like this.
        
         | baja_blast wrote:
         | Worse yet, before the pandemic there was more political
         | pressure to regulate and discuss the risks of such research.
         | Now it feels like politicians are afraid to even discuss it.
         | Places like NYT used to occasionally post articles like
         | https://www.nytimes.com/2012/03/04/opinion/sunday/the-truth-...
         | and https://www.nytimes.com/2012/06/22/health/h5n1-bird-flu-
         | rese... but now you will never seem anything like this
         | published. It is as if the concerns over lab accidents has all
         | but disappeared!
        
         | brippalcharrid wrote:
         | Yes, but if we can't attract the world's foremost virologists
         | to programs that we have some degree of control over in the
         | middle of international cities where they can engage in serial
         | passaging of airborne HIV in the morning, and then get lunch at
         | places that are trending, authentic and cutting-edge, then
         | they'll just go to a program in another country that doesn't
         | have these restrictions.
         | 
         | No-one wants to live in an underground facility for weeks or
         | months at a time when they could be making the most of living
         | in a major city, not even virologists working on pathogens that
         | are being modified to see what would happen if there was a
         | pathogen whose evolution was guided in a particularly
         | interesting direction and compressed from decades to weeks or
         | even days.
         | 
         | Anyway, if we were to ask the world's foremost experts in the
         | virological community whether we should restrict such research
         | to carefully-controlled remote locations subject to stringent
         | controls, long quarantines and strict oversight, then we might
         | find that the answer was similar to when we asked "is if likely
         | or even within the realm of possibility that SARS-CoV-2
         | originated from a lab in Wuhan as result of Gain-of-Function
         | research". And they might insist that we listen to them because
         | they were the experts, and they would probably find a lot of
         | support in the government and the media.
        
         | neilv wrote:
         | For one itemization of a lot of the concerns at the time,
         | here's a Massachusetts Nurses Association statement, dated
         | 2005, from their perspective:
         | 
         | https://web.archive.org/web/20101125034813/https://www.massn...
        
         | VyseofArcadia wrote:
         | > I don't know why anyone at BU would risk modifying Covid
         | without the utmost precautions
         | 
         | My wife was a laboratory inspector for a while. She'd come home
         | with the craziest stories about how such-and-such lab tried to
         | get away with this or that. I'd have the same question every
         | time. "Why?!" Protocols only work if they're followed. We have
         | such a long history of disasters, major or minor, because of
         | negligence[0]. Cutting corners, operating outside the envelope,
         | etc.
         | 
         | She'd always just shrug and say, "familiarity breeds
         | contempt".[1]
         | 
         | [0] My favorite is Chernobyl.
         | 
         | [1] Also, a lot of scientists have this, "I know what I'm
         | doing" attitude and see safety precautions as holding them
         | back. It doesn't help that most of them see grad students as
         | expendable.
        
           | thrown_22 wrote:
           | >[0] My favorite is Chernobyl.
           | 
           | Biology is different to physics or chemistry. The worst
           | nuclear accident can kill a few million people. The worst
           | chemistry accident can kill a few hundreds of thousands of
           | people. The worst biology accident can kill _everyone_.
        
       | dinvlad wrote:
       | Considering all the negative comments here, I'd say we should be
       | just as careful trusting "science" news reporting as we think
       | science itself should be (which it is). The official statement
       | from BU makes a good point on that [0].
       | 
       | The sensationalism perpetuated by far right-wing news outlets is
       | in fact the main danger here. Yes, there's always room for
       | improvement, but if we are not experts able to understand the
       | research as it was actually conducted, imho we should not jump to
       | conclusions and blame the scientists etc. This only serves one
       | goal (of those far-right orgs) to further diminish trust in
       | science among the general public.
       | 
       | [0] https://www.bu.edu/articles/2022/neidl-researchers-refute-
       | uk...
        
         | TMWNN wrote:
         | First, Statnews is not a "far right-wing news outlet".
         | 
         | Second, quoting from said Statnews article:
         | 
         | >But it has become apparent that the research team did not
         | clear the work with the National Institute of Allergy and
         | Infectious Diseases, which was one of the funders of the
         | project. The agency indicated it is going to be looking for
         | some answers as to why it first learned of the work through
         | media reports.
         | 
         | >Emily Erbelding, director of NIAID's division of microbiology
         | and infectious diseases, said the BU team's original grant
         | applications did not specify that the scientists wanted to do
         | this precise work. Nor did the group make clear that it was
         | doing experiments that might involve enhancing a pathogen of
         | pandemic potential in the progress reports it provided to
         | NIAID.
         | 
         | >"I think we're going to have conversations over upcoming
         | days," Erbelding told STAT in an interview.
         | 
         | The BU press release does not address this at all.
        
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