[HN Gopher] First Blood Test for Dozens of Hereditary Cancers Ap...
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       First Blood Test for Dozens of Hereditary Cancers Approved by FDA
        
       Author : birriel
       Score  : 136 points
       Date   : 2023-10-02 21:02 UTC (1 hours ago)
        
 (HTM) web link (www.insideprecisionmedicine.com)
 (TXT) w3m dump (www.insideprecisionmedicine.com)
        
       | reaperman wrote:
       | For clarification, it tests for 47 genes which are associated
       | with increased risk of cancer. It doesn't help tell you whether
       | or not you have cancer, in contrast to blood tests like Galleri,
       | which can do that.
       | 
       | 0: https://www.galleri.com/
        
         | nsxwolf wrote:
         | In what way is any of that actionable? Are there specific
         | recommendations besides "eat right, exercise, don't smoke"?
         | Sounds like something that could just induce anxiety.
        
           | cmcaleer wrote:
           | It's actionable by your insurance provider.
        
             | kulahan wrote:
             | It explicitly is not, thanks to the GINA act.
        
           | evangow wrote:
           | If you know you are at risk for specific cancers, then you
           | would likely get tested more regularly and could potentially
           | catch them at an earlier stage when they're usually more
           | treatable.
           | 
           | I haven't looking into this specifically, so I have no idea
           | if that works for the types of cancers this tests for. My
           | point is applies to testing just generally speaking
        
           | rmbyrro wrote:
           | In at least a few of those cancers, there can be other
           | applicable lifestyle changes.
           | 
           | Also, patient can get an ultrasound exam (or other
           | applicable) more frequently for an organ that's under a
           | higher risk.
        
           | jameshart wrote:
           | Or if it turns out you lack the genetic predisposing factors,
           | risk-homeostasis your way into justifying smoking and eating
           | badly and exercising less.
        
           | throwitawayfam wrote:
           | The comment you've replied to is about the Galleri test by
           | Grail. It tests for early _detection_ of cancer, not
           | likelihood of cancer. Meaning, you _have_ cancer. Knowing you
           | have cancer (hopefully early) is actionable...
        
           | PlunderBunny wrote:
           | I believe that some woman with a hereditary risk of breast
           | cancer voluntarily undergo mastectomies even prior to cancer
           | being detected.
        
         | margalabargala wrote:
         | There are plenty of blood tests out there that can potentially
         | let you know whether you have cancer. Here's another one:
         | https://www.personalgenome.com/products/elio-plasma-resolve
         | 
         | The thing all of these have in common is that they aren't FDA-
         | approved, they're just CLIA assays.
         | 
         | Invitae's test in the original article _is_ FDA-approved, which
         | is no small feat. That 's not easy to do and lends a lot of
         | credence to their tech.
         | 
         | If Grail could get their test FDA-approved, they would have
         | done so.
        
           | notQuiteEither wrote:
           | As someone in the field, I can say with certainty to expect
           | FDA approved liquid biopsy tests (for somatic variants) to
           | start appearing on market in the next year, if not sooner.
           | 
           | I'll also point out that detecting germline variants (which
           | is what Invitae is doing) is considerably easier than somatic
           | variants, which is what tests ala Grail and PGDx do. Of
           | course this doesn't discount the work of Invitae, absolutely
           | sound tech behind it.
        
             | biotinker wrote:
             | Yeah I'm willing to bet there are more than one liquid
             | biopsy tests submitted and likely to get approved.
             | 
             | I worked at PGDx for ~5 years and wrote an appreciable
             | chunk of their bioinformatics pipeline, though I moved on
             | to a different industry back in 2020 and am now out of date
             | by that much. Though if you had asked me then, I would have
             | bet that the first liquid biopsy test would be out by now;
             | when I left was a short while after they had the first
             | solid tumor somatic test FDA-approved.
        
       | extraduder_ire wrote:
       | For anyone not reading the article, it's done via "next-
       | generation sequencing" of DNA in the blood.
        
       | copperx wrote:
       | While this is fantastic, aren't these genes identified by 23andme
       | other low-cost DNA tests? I'm sure they do the BRCA1 and BRCA2
       | variants.
       | 
       | Or are there many more variants in this test?
        
         | dekhn wrote:
         | There's a big difference between what 23&Me includes in their
         | technology and reports compared to solutions that are
         | production grade medical tests. That said, 23&Me does tout
         | their results as being medically relevant
         | (https://www.23andme.com/brca/)
         | 
         | (for a while, only Myriad could do any tests with brca1/2
         | because they had a patent on the literal gene sequence. it went
         | to the supreme court and the court said no, you cannot patent
         | human gene sequences)
        
         | rflrob wrote:
         | 23andMe works by checking ~1M sites along the genome, and using
         | known correlations with pathogenic variants. This Invitae test
         | actually sequences the (coding portion plus a bit of) the genes
         | involved, and can detect rare[0] mutations. Additionally,
         | Invitae puts a ton of effort into determining whether any
         | particular variant (of which you certainly have very many) is
         | benign or pathogenic.
         | 
         | Invitae has argued that (especially in certain under-
         | represented populations), the 23andme approach is going to miss
         | a lot of important variants [1].
         | 
         | _disclaimer: I'm a former Invitae employee and still holding
         | the bag on what used to be a lot of stock . All opinions are my
         | own. _
         | 
         | [0] Rare on the population scale. To a good approximation each
         | person has only 0, 1, or 2 copies of any given polymorphism.
         | 
         | [1] https://www.biospace.com/article/invitae-challenges-
         | accuracy...
        
         | [deleted]
        
         | joysofpi wrote:
         | they use different approaches. 23andme even has a short writeup
         | on this: https://customercare.23andme.com/hc/en-
         | us/articles/202904600...
        
       | jncfhnb wrote:
       | I did one of their tests for some IVF stuff. Frankly if you can
       | do this it seems like it's almost unethical not to check if you
       | and your partner don't have some sort of horrible incompatibility
       | that you should try to work around with IVF.
        
       | elamje wrote:
       | The Galleri test by Grail detects 40+ types of cancer, some as
       | early as stage 1, with a blood test.
       | 
       | It's about $1000 per test.
        
       | technocratius wrote:
       | My primary concern with these are: what will it mean in a
       | possible future to know your risk profile, and your ability to
       | get/maintain health insurance, also without having to pay
       | premiums. I live in the Netherlands, so probably not too much,
       | but US could be different, and who knows what the future holds.
       | Anyway, this makes me less/not want to take them...
        
         | marc__1 wrote:
         | In the USA there is The Genetic Information Nondiscrimination
         | Act from 2008 that bars insurance discrimination based on your
         | genes. I assume this will become a landmark law in the next 50
         | years as society becomes familiarized with routine blood (I
         | mean gene) tests to drive preventive care to the next level
         | 
         | https://www.genome.gov/about-genomics/policy-issues/Genetic-...
        
         | carbocation wrote:
         | GINA should protect you against this (for health insurance) in
         | the US but it does not necessarily extend to other forms of
         | insurance.
        
           | schemescape wrote:
           | More info on the situation in the US: https://medlineplus.gov
           | /genetics/understanding/dtcgenetictes...
        
           | kulahan wrote:
           | GINA needs to be much, much stronger for me to feel safe.
           | There's a lot of potential money to be made from genetic
           | information.
        
             | ethbr1 wrote:
             | There's a lot of money to be made from a lot of enriched
             | genetic information.
             | 
             | Is there a lot of money to be made from one individual's
             | genetic information?
        
         | autoexec wrote:
         | I wonder if this could keep you from even being hired for a
         | job. Given two otherwise equal candidates I can imagine some
         | companies may wish to choose the one which doesn't have a risk
         | for a major cancer.
        
           | dragonwriter wrote:
           | It could be, though in the US this type of thing has been
           | anticipated, hence the Genetic Information Non-Discrimination
           | Act of 2008.
        
             | ethbr1 wrote:
             | And critically, that's banned at common points of use,
             | rather than collection.
             | 
             | Which I think is more important given how leaky a sieve
             | prohibiting the multitudinous hydra that collection is.
             | 
             | Although I wouldn't be sad to see strict laws around
             | genetic info storage too. Toxic waste, etc.
        
         | loeg wrote:
         | It shouldn't be a problem in the US. The ACA requires insurers
         | to insure people with pre-existing conditions. (And GINA is
         | also relevant here, as sibling mentioned. I was struggling to
         | remember its name.)
        
           | chimeracoder wrote:
           | > It shouldn't be a problem in the US. The ACA requires
           | insurers to insure people with pre-existing conditions.
           | 
           | The ACA requires insurers to cover people under the age of 65
           | with pre-existing conditions and, more importantly, requires
           | them to provide coverage at the same prices regardless of
           | those conditions (they can only set price using a few pieces
           | of information: age, zip code, smoking status, etc.).
           | However, there are a lot of ways that insurers already skirt
           | that second part, such as offering "discounts" to patients
           | for certain elections which are strongly negatively
           | correlated with various pre-existing conditions.
           | 
           | Furthermore, the ACA has seen a number of challenges over the
           | last few years - most recently, the requirement to cover
           | preventive care at no cost to the patient was struck down a
           | few months ago. There's plenty of reason to suspect that this
           | provision will be challenged in the future as well, and could
           | easily be overturned.
        
         | [deleted]
        
       | jseliger wrote:
       | This is great! I got the Invitae test (due to this:
       | https://jakeseliger.com/2023/07/22/i-am-dying-of-squamous-ce...),
       | and, from what I understand, FDA approval means it'll be covered
       | by insurance.
       | 
       | I've been told by oncologists that blood testing is presently the
       | wild west of cancer profiling. Getting blood testing like CARIS:
       | https://www.carislifesciences.com/products-and-services/mole...
       | or Guardant360: https://guardanthealth.com/products/tests-for-
       | patients-with-... approved seems important from an insurance
       | standpoint.
        
         | capnkap wrote:
         | FDA authorization has nothing to do with insurance coverage. I
         | know of a small manufacturer that's had an authorized product
         | on the market for over 3 years, not a single insurance company
         | will cover it.
         | 
         | Insurance coverage is basically a waiting game between
         | manufacturers and insurance companies. If you have enough
         | capital to wait it out and schmooze executives, then you can
         | get coverage. If not, good luck to you.
        
           | ethanbond wrote:
           | FDA authorization definitely _does_ have something to do with
           | insurance coverage, it just isn't a necessary nor sufficient
           | condition.
        
           | notQuiteEither wrote:
           | FDA approval makes it considerably easier, and in many cases
           | possible at all, to get reimbursement for these tests. I work
           | in the field and this is a constant hurdle to overcome.
        
       | satvikpendem wrote:
       | I suppose then that Theranos was never really viable based on the
       | technology back then, as this seems to use "next-generation
       | sequencing" tech.
        
         | inglor_cz wrote:
         | What Theranos did was like promising a ticket to the Moon for
         | 50 dollars one way.
         | 
         | No one doubts that you can fly to the Moon for 50 billion
         | dollars. Perhaps, in the future, it will be feasible to fly
         | there for 5 million dollars. But 50 dollars is beyond the
         | realms of possibility.
        
         | tptacek wrote:
         | It looks like Invitae is a full blood draw, done with a
         | phlebotomist, not a microfluidic pin-prick invention.
        
       | ourmandave wrote:
       | You have to play the hand your dealt, so to speak.
       | 
       | But knowing your odds is good.
       | 
       | Better is when we can cure cancers so you get to draw new cards.
        
       | lepus wrote:
       | Invitae has done some good work scaling up genetic testing and
       | increasing its accessibility, but tried to play a risky high
       | growth game and paid the price when the economic landscape
       | started to shift. Hopefully their efforts aren't lost if the
       | company doesn't survive in its current form long-term.
        
       | NKosmatos wrote:
       | What's the cost of this test? We're going to see many DNA
       | sequencing tests being available in the near future, but I hope
       | they're not going to be expensive so that diagnosis and
       | prevention can be available to all.
        
       | renewiltord wrote:
       | I have full genome sequence. Are the variants present somewhere I
       | can download so I can match it up against my FASTQ?
        
       | spullara wrote:
       | This isn't a test for hereditary cancers. It is test for the
       | gene's that indicate you have an increased risk for hereditary
       | cancers. It matters as there are actual blood tests for cancer
       | available now.
        
       | user3939382 wrote:
       | You thought dating was hard now...
        
       | killingtime74 wrote:
       | If interested, there's already DNA Genetic testing that screens
       | for many conditions (more? Not sure about overlap). No blood draw
       | necessary, only saliva. They also screen for partners who are
       | hoping to conceive. Contact a Genetic Counselor.
        
       | tikkun wrote:
       | Which preventative health tests are most worth doing? I'm in my
       | early 30s and willing to pay out of pocket if something is good.
       | 
       | E.g. ezra, prenuvo, q bio, Grail, Freenome, other regular blood
       | testing, and then things like this.
        
         | [deleted]
        
         | ck_one wrote:
         | I am in the same situation. Would love for somebody with more
         | knowledge to jump in and give some hints.
        
       | ortusdux wrote:
       | Direct link to FDA announcement: https://www.fda.gov/news-
       | events/press-announcements/fda-gran...
        
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       (page generated 2023-10-02 23:00 UTC)